RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ISCA2Q86U28 154 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 HORMAD1Q86X24 394 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 PHYKPLQ8IUZ5 450 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 NUDCD3Q8IVD9 361 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 LRRC8CQ8TDW0 803 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 ZNF75CPQ92670 426 aaPredicted RBP13.27□□□□□ -0.29
VMP1-217ENST00000593168 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.29
VMP1-217ENST00000593168 CHMP6Q96FZ7 201 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 SCYL1Q96KG9 808 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 HHIPQ96QV1 700 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 DERL2Q9GZP9 239 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 TFB2MQ9H5Q4 396 aaKnown RBP13.27□□□□□ -0.29
VMP1-217ENST00000593168 MANSC1Q9H8J5 431 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 ITM2CQ9NQX7 267 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 SPATS2LQ9NUQ6 558 aaKnown RBP13.27□□□□□ -0.29
VMP1-217ENST00000593168 GALPQ9UBC7 116 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 ZFR2Q9UPR6 939 aaKnown RBP13.27□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3DA0A087WVF3 549 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3IA0A087WXS9 549 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3EA0A087X179 549 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3KA0A087X1G2 549 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 A0A1W2PQU0 124 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3FA6NER0 549 aaPredicted RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 TCP11X1B4DZS4 312 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3LB9A6J9 549 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 KPNA5O15131 536 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 MAGEC1O60732 1142 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 IGLV3-19P01714 112 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 SBK3P0C264 359 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3HP0C7X1 549 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 HOXB3P14651 431 aaPredicted RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 TPMTP51580 245 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 SEC24CP53992 1094 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 PRKAA2P54646 552 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 IL2P60568 153 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TMEM115Q12893 351 aaPredicted RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 SGCGQ13326 291 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 COL9A2Q14055 689 aaPredicted RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 WSCD2Q2TBF2 565 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TECRLQ5HYJ1 363 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 FAM208BQ5VWN6 2430 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 SEL1L3Q68CR1 1132 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3GQ6DHY5 549 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3CQ6IPX1 549 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 PNCKQ6P2M8 343 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 UNQ6494/PRO21346Q6UXR6 183 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TBC1D3Q8IZP1 549 aaPredicted RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 PELI3Q8N2H9 469 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 SPATA6LQ8N4H0 392 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 CAMKK1Q8N5S9 505 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 SIDT2Q8NBJ9 832 aaKnown RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 GIMAP7Q8NHV1 300 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 RHEBL1Q8TAI7 183 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 SLC30A3Q99726 388 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 EDEM2Q9BV94 578 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TSSK1BQ9BXA7 367 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 C1QTNF7Q9BXJ2 289 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 SLC17A9Q9BYT1 436 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 ZCCHC2Q9C0B9 1178 aaKnown RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 SGK2Q9HBY8 427 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 TRIM39Q9HCM9 518 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 USP36Q9P275 1121 aaKnown RBP13.26□□□□□ -0.29
VMP1-217ENST00000593168 XPR1Q9UBH6 696 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 ZMIZ1Q9ULJ6 1067 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 WASF3Q9UPY6 502 aa13.26□□□□□ -0.29
VMP1-217ENST00000593168 PIKFYVEQ9Y2I7 2098 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 G3V2L1 256 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 K7ESM1 405 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 EIF3FO00303 357 aaPredicted RBP13.25□□□□□ -0.29
VMP1-217ENST00000593168 SGTAO43765 313 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 TRIM16O95361 564 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 TSPAN12O95859 305 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 PAK4O96013 591 aaPredicted RBP13.25□□□□□ -0.29
VMP1-217ENST00000593168 VIMP08670 466 aaKnown RBP13.25□□□□□ -0.29
VMP1-217ENST00000593168 CBSLP0DN79 551 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 MYL2P10916 166 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 NEFHP12036 1026 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 TFEBP19484 476 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 SPINK2P20155 84 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 DGKAP23743 735 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 ALDH3A1P30838 453 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 CBSP35520 551 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 GLRBP48167 497 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 RGS4P49798 205 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 NOVA1P51513 510 aaKnown RBP13.25□□□□□ -0.29
VMP1-217ENST00000593168 FGL2Q14314 439 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 PCLAFQ15004 111 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 TTLL9Q3SXZ7 439 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 KHDC1Q4VXA5 237 aaKnown RBP13.25□□□□□ -0.29
VMP1-217ENST00000593168 ATG16L1Q676U5 607 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 ZYG11AQ6WRX3 759 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 LRRC34Q8IZ02 419 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 ZBTB2Q8N680 514 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 RASGEF1AQ8N9B8 481 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 LKAAEAR1Q8TD35 194 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 SREK1Q8WXA9 508 aaKnown RBP13.25□□□□□ -0.29
VMP1-217ENST00000593168 KIAA1191Q96A73 305 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 FAM136AQ96C01 138 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms