RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PEX13Q92968 403 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 TMEM159Q96B96 161 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 LIN37Q96GY3 246 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 C12orf66Q96MD2 445 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 NUDT22Q9BRQ3 303 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 TSSK1BQ9BXA7 367 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 TBC1D10AQ9BXI6 508 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 WWP1Q9H0M0 922 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 SEMA6CQ9H3T2 930 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 EPB41L1Q9H4G0 881 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 THSD1Q9NS62 852 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 CATSPERZQ9NTU4 200 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 POT1Q9NUX5 634 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 ZNF624Q9P2J8 865 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-227ENST00000591849 RNF14Q9UBS8 474 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 DKK4Q9UBT3 224 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 PISDQ9UG56 409 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 KLHL3Q9UH77 587 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 RAXQ9Y2V3 346 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 LOXL2Q9Y4K0 774 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 COLEC10Q9Y6Z7 277 aa9.88□□□□□ -0.83
BRCA1-227ENST00000591849 CELSR3Q9NYQ7 3312 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 TRBV5-4A0A0C4DH59 114 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 C17orf113A0A1B0GUU1 675 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 TCRBV7S3A2A0A539 114 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 MAGEB16A2A368 324 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 LILRA5A6NI73 299 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 SDR42E2A6NKP2 422 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 AGAP14A8MT82 685 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 UBXN7O94888 489 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 GSTM1P09488 218 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 BRAFP15056 766 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 FOXN2P32314 431 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 PRLHRP49683 370 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 MAPK10P53779 464 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 UBE2IP63279 158 aaKnown RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 GSTM4Q03013 218 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 ZFP36L1Q07352 338 aaKnown RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 DMPKQ09013 629 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 TRA2AQ13595 282 aaKnown RBP eCLIP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 KCNJ11Q14654 390 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 NR1D2Q14995 579 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 BRD3Q15059 726 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 RPE65Q16518 533 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 TBC1D25Q3MII6 688 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 SYTL3Q4VX76 610 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 TMEM164Q5U3C3 297 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 ARMC6Q6NXE6 501 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 TMEM71Q6P5X7 295 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 KLHL35Q6PF15 583 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 CES3Q6UWW8 571 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 FAM83HQ6ZRV2 1179 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 PCGF5Q86SE9 256 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 PROSER1Q86XN7 944 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 PLXDC1Q8IUK5 500 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 PPIL6Q8IXY8 311 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 CLDN19Q8N6F1 224 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 OR4D9Q8NGE8 314 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 OR13J1Q8NGT2 312 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 CPT1BQ92523 772 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 ELMO1Q92556 727 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 NAF1Q96HR8 494 aaKnown RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 LINC00615Q96LM1 132 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 CCDC74BQ96LY2 380 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 ZNF778Q96MU6 729 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 ZNF578Q96N58 590 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 FERD3LQ96RJ6 166 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 DDX47Q9H0S4 455 aaKnown RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 UCK1Q9HA47 277 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 XAB2Q9HCS7 855 aaKnown RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 SYBUQ9NX95 663 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 RALYQ9UKM9 306 aaKnown RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 WDR37Q9Y2I8 494 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 HEBP2Q9Y5Z4 205 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 CFAP20Q9Y6A4 193 aaKnown RBP9.87□□□□□ -0.83
BRCA1-227ENST00000591849 MAD1L1Q9Y6D9 718 aa9.87□□□□□ -0.83
BRCA1-227ENST00000591849 ASXL3Q9C0F0 2248 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 IGLV3-16A0A075B6K0 115 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 IGHV5-10-1A0A0J9YXX1 117 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 CCDC188H7C350 402 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 CD3EAPO15446 510 aaKnown RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 AVILO75366 819 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 RASSF9O75901 435 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 VAPBO95292 243 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 MLNP12872 115 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 HGFP14210 728 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 ITGB6P18564 788 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 PSMA3P25788 255 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 NDUFS1P28331 727 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 NMBRP28336 390 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 TTPAP49638 278 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 LIMK2P53671 638 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 PCBP4P57723 403 aaKnown RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 ERVPABLB-1P60509 514 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 DR1Q01658 176 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 SQSTM1Q13501 440 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 THOC5Q13769 683 aaKnown RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 ANKRD22Q5VYY1 191 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms