RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 MTX2O75431 263 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 SCRG1O75711 98 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 ITGA1P56199 1179 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 PLEKHN1Q494U1 663 aaPredicted RBP16.95■□□□□ 0.3
RETREG3-210ENST00000590541 ODF2Q5BJF6 829 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 ALS2CLQ60I27 953 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 CISD2Q8N5K1 135 aaKnown RBP16.95■□□□□ 0.3
RETREG3-210ENST00000590541 PQLC3Q8N755 202 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 GLIS1Q8NBF1 620 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.95■□□□□ 0.3
RETREG3-210ENST00000590541 RAPGEF5Q92565 580 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 GLYATL1Q969I3 302 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 MLPHQ9BV36 600 aaPredicted RBP16.95■□□□□ 0.3
RETREG3-210ENST00000590541 MAK16Q9BXY0 300 aaKnown RBP16.95■□□□□ 0.3
RETREG3-210ENST00000590541 RBM22Q9NW64 420 aaKnown RBP eCLIP16.95■□□□□ 0.34e-8■■■■□ 23.7
RETREG3-210ENST00000590541 GPR83Q9NYM4 423 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 TRIM10Q9UDY6 481 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 TTLL3Q9Y4R7 772 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 PCSK5Q92824 1860 aa16.95■□□□□ 0.3
RETREG3-210ENST00000590541 FBN2P35556 2912 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 ANKUB1A6NFN9 424 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 ANKRD66B4E2M5 251 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 HLA-DQB2P05538 268 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 PRF1P14222 555 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 IDSP22304 550 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 FECHP22830 423 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 HADHBP55084 474 aaKnown RBP16.94■□□□□ 0.3
RETREG3-210ENST00000590541 KHDC1Q4VXA5 237 aaKnown RBP16.94■□□□□ 0.3
RETREG3-210ENST00000590541 C11orf96Q7Z7L8 435 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 KMT5CQ86Y97 462 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 TMEM126BQ8IUX1 230 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 CCDC170Q8IYT3 715 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 IQCKQ8N0W5 287 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 SLC34A3Q8N130 599 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 D2HGDHQ8N465 521 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 TRAM1L1Q8N609 369 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 ENDOVQ8N8Q3 282 aaKnown RBP16.94■□□□□ 0.3
RETREG3-210ENST00000590541 CCNYQ8ND76 341 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 GPR150Q8NGU9 434 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 ZSCAN5AQ9BUG6 496 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 LUC7LQ9NQ29 371 aaKnown RBP16.94■□□□□ 0.3
RETREG3-210ENST00000590541 TCFL5Q9UL49 500 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 G3BP2Q9UN86 482 aaKnown RBP16.94■□□□□ 0.3
RETREG3-210ENST00000590541 SNX7Q9UNH6 387 aa16.94■□□□□ 0.3
RETREG3-210ENST00000590541 KRT38O76015 456 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 MMP2P08253 660 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 RAB40ALP0C0E4 278 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 VAV2P52735 878 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 DCDC1P59894 354 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 TUBB4BP68371 445 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 GBE1Q04446 702 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 PPIDQ08752 370 aaKnown RBP16.93■□□□□ 0.3
RETREG3-210ENST00000590541 TUBB2AQ13885 445 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 PDK1Q15118 436 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 GPR19Q15760 415 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 PLEKHS1Q5SXH7 462 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 PRAMEF17Q5VTA0 474 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 SLC9A4Q6AI14 798 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 MED25Q71SY5 747 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 BZW1Q7L1Q6 419 aaKnown RBP16.93■□□□□ 0.3
RETREG3-210ENST00000590541 CPNE8Q86YQ8 564 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 ZBTB2Q8N680 514 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 TMEM102Q8N9M5 508 aaPredicted RBP16.93■□□□□ 0.3
RETREG3-210ENST00000590541 ZNF501Q96CX3 271 aaPredicted RBP16.93■□□□□ 0.3
RETREG3-210ENST00000590541 LRFN5Q96NI6 719 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 TUBB2BQ9BVA1 445 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 ZFYVE1Q9HBF4 777 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 KCND1Q9NSA2 647 aa16.93■□□□□ 0.3
RETREG3-210ENST00000590541 OTOGQ6ZRI0 2925 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 C3orf70A6NLC5 250 aaPredicted RBP16.92■□□□□ 0.3
RETREG3-210ENST00000590541 APOL1O14791 398 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 PPP1R12AO14974 1030 aaPredicted RBP16.92■□□□□ 0.3
RETREG3-210ENST00000590541 CDK14O94921 469 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 LCA5LO95447 670 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 CAPN1P07384 714 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 ARL4DP49703 201 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 IFI35P80217 286 aaPredicted RBP16.92■□□□□ 0.3
RETREG3-210ENST00000590541 HSD11B2P80365 405 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 SLC10A2Q12908 348 aaPredicted RBP16.92■□□□□ 0.3
RETREG3-210ENST00000590541 RAPSNQ13702 412 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 CRB2Q5IJ48 1285 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 PDPK2PQ6A1A2 396 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 DSELQ8IZU8 1212 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 PLD5Q8N7P1 536 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 TC2NQ8N9U0 490 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 LRRN4Q8WUT4 740 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 CALR3Q96L12 384 aaKnown RBP16.92■□□□□ 0.3
RETREG3-210ENST00000590541 NLNQ9BYT8 704 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 NFKBIL1Q9UBC1 381 aaPredicted RBP16.92■□□□□ 0.3
RETREG3-210ENST00000590541 CROCCQ5TZA2 2017 aa16.92■□□□□ 0.3
RETREG3-210ENST00000590541 TLCD2A6NGC4 264 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 MEN1O00255 615 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 SPOPO43791 374 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 VEGFDO43915 354 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 KLK3P07288 261 aaPredicted RBP16.91■□□□□ 0.3
RETREG3-210ENST00000590541 CYLC1P35663 651 aaPredicted RBP16.91■□□□□ 0.3
RETREG3-210ENST00000590541 MAGEA1P43355 309 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 NR2C2P49116 596 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 GSDMDP57764 484 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 TFDP2Q14188 446 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms