RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ABTB1Q969K4 478 aaPredicted RBP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 PIGTQ969N2 578 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 CDCA5Q96FF9 252 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 PGAP3Q96FM1 320 aaPredicted RBP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 RADILQ96JH8 1075 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 CNDP2Q96KP4 475 aaKnown RBP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 DGAT2Q96PD7 388 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 NEK1Q96PY6 1258 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 NODALQ96S42 347 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 OR10A4Q9H209 315 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 UBTD1Q9HAC8 227 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF224Q9NZL3 707 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 BCCIPQ9P287 314 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 PADI3Q9ULW8 664 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 AMDHD2Q9Y303 409 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF711Q9Y462 761 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 PCDHAC2Q9Y5I4 1007 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 TRPV2Q9Y5S1 764 aa3.36□□□□□ -1.87
SMAD4-207ENST00000589076 ASTN2O75129 1339 aaPredicted RBP3.36□□□□□ -1.87
SMAD4-207ENST00000589076 A0A1W2PP11 408 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ANTXRLA6NF34 631 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ERI2A8K979 691 aaKnown RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 H7C0S8 307 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 TMEM189-UBE2V1I3L0A0 370 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 BUD23O43709 281 aaKnown RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 PRAMEF11O60813 436 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ZWINTO95229 277 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 PMS2P2O95744 297 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 APOA4P06727 396 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 LINC00271P0C7V0 271 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 NMBRP28336 390 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 CORO1AP31146 461 aaKnown RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 UBE2V1Q13404 147 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ALCAMQ13740 583 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 SNTB1Q13884 538 aaKnown RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 SNAPC1Q16533 368 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 CBWD6Q4V339 395 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 TMEM35AQ53FP2 167 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 SETMARQ53H47 684 aaPredicted RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 CBWD3Q5JTY5 395 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF704Q6ZNC4 412 aaPredicted RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ATG9AQ7Z3C6 839 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 GALNT13Q8IUC8 556 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 C1orf87Q8N0U7 546 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 LMNTD1Q8N9Z9 388 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 TDRD5Q8NAT2 981 aaKnown RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 SPATA22Q8NHS9 363 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 TBC1D16Q8TBP0 767 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 TAS1R2Q8TE23 839 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 PPP4R1Q8TF05 950 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 LPGAT1Q92604 370 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF653Q96CK0 615 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ARSGQ96EG1 525 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 TMEM19Q96HH6 336 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 SLC22A12Q96S37 553 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 HGH1Q9BTY7 390 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 CCDC177Q9NQR7 707 aaPredicted RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 TCP11L1Q9NUJ3 509 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 TAS2R14Q9NYV8 317 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 CRNNQ9UBG3 495 aaPredicted RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 GIMAP2Q9UG22 337 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 IL17BQ9UHF5 180 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 DDX25Q9UHL0 483 aaKnown RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 ZHX1Q9UKY1 873 aaPredicted RBP3.35□□□□□ -1.87
SMAD4-207ENST00000589076 VDAC3Q9Y277 283 aa3.35□□□□□ -1.87
SMAD4-207ENST00000589076 A0A0G2JPF8 293 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 MAGEA13PA6NCF6 341 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 C15orf62A8K5M9 175 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 ANKRD66B4E2M5 251 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 HNRNPCL3B7ZW38 293 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 TBX10O75333 385 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 BCL10O95999 233 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 HNRNPCL4P0DMR1 293 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 MYBL1P10243 752 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 GNL1P36915 607 aaPredicted RBP3.34□□□□□ -1.87
SMAD4-207ENST00000589076 USP8P40818 1118 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 CCR3P51677 355 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 BRWD1-AS2P59051 145 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 SNRPEP62304 92 aaKnown RBP3.34□□□□□ -1.87
SMAD4-207ENST00000589076 ZNF234Q14588 700 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 MELKQ14680 651 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 PSMD6Q15008 389 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 SF3B4Q15427 424 aaKnown RBP eCLIP3.34□□□□□ -1.87
SMAD4-207ENST00000589076 CCDC96Q2M329 555 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 PLEKHM3Q6ZWE6 761 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 PLPPR4Q7Z2D5 763 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 ADIPOR2Q86V24 386 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 CEP57Q86XR8 500 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 KCNH5Q8NCM2 988 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 SLC20A1Q8WUM9 679 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 SLC44A1Q8WWI5 657 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 FIG4Q92562 907 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 BICD1Q96G01 975 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 PCYT2Q99447 389 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 NEURL2Q9BR09 285 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 AP1M1Q9BXS5 423 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 MOV10L1Q9BXT6 1211 aaKnown RBP3.34□□□□□ -1.87
SMAD4-207ENST00000589076 LRMDAQ9H2I8 198 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 GAREM1Q9H706 876 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 ERVMER34-1Q9H9K5 563 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms