RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 SERPINB12Q96P63 405 aa22.81■■□□□ 1.24
LSM7-203ENST00000585409 TRNAU1APQ9NX07 287 aaKnown RBP22.81■■□□□ 1.24
LSM7-203ENST00000585409 ANAPC5Q9UJX4 755 aa22.81■■□□□ 1.24
LSM7-203ENST00000585409 CNOT6Q9ULM6 557 aaKnown RBP22.81■■□□□ 1.24
LSM7-203ENST00000585409 SDK2Q58EX2 2172 aa22.81■■□□□ 1.24
LSM7-203ENST00000585409 C9orf172C9J069 976 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 GOLGA8MH3BSY2 632 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 RAD51CO43502 376 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 WT1P19544 449 aaPredicted RBP22.8■■□□□ 1.24
LSM7-203ENST00000585409 CACNG1Q06432 222 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 ILF3Q12906 894 aaKnown RBP eCLIP22.8■■□□□ 1.24
LSM7-203ENST00000585409 LRP8Q14114 963 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 TBR1Q16650 682 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 C14orf28Q4W4Y0 310 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 ZRANB3Q5FWF4 1079 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 ZNF534Q76KX8 674 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 TRIM74Q86UV6 250 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 VASH2Q86V25 355 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 SFTPA2Q8IWL1 248 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 PDIK1LQ8N165 341 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 DDHD1Q8NEL9 900 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 DCUN1D1Q96GG9 259 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 SCARF2Q96GP6 870 aaPredicted RBP22.8■■□□□ 1.24
LSM7-203ENST00000585409 OR2M4Q96R27 311 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 CMKLR1Q99788 373 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 GSDMCQ9BYG8 508 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 TRIM31Q9BZY9 425 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 B3GNT4Q9C0J1 378 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 SUFUQ9UMX1 484 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 SOX13Q9UN79 622 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 TMEM98Q9Y2Y6 226 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 RNF215Q9Y6U7 377 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 COL12A1Q99715 3063 aa22.8■■□□□ 1.24
LSM7-203ENST00000585409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.79■■□□□ 1.24
LSM7-203ENST00000585409 SEC31AO94979 1220 aaKnown RBP22.79■■□□□ 1.24
LSM7-203ENST00000585409 MSH3P20585 1137 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 CD82P27701 267 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 AKT1P31749 480 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 GNPDA1P46926 289 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 XIAPP98170 497 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 AARS2Q5JTZ9 985 aaKnown RBP22.79■■□□□ 1.24
LSM7-203ENST00000585409 LYPLAL1Q5VWZ2 237 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 CAND1Q86VP6 1230 aaKnown RBP22.79■■□□□ 1.24
LSM7-203ENST00000585409 USP7Q93009 1102 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 ZNF514Q96K75 400 aaPredicted RBP22.79■■□□□ 1.24
LSM7-203ENST00000585409 NAT9Q9BTE0 207 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 KIFC1Q9BW19 673 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 SYBUQ9NX95 663 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 WHRNQ9P202 907 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 LRIT1Q9P2V4 623 aa22.79■■□□□ 1.24
LSM7-203ENST00000585409 ZNF106Q9H2Y7 1883 aaKnown RBP22.79■■□□□ 1.24
LSM7-203ENST00000585409 F8W8V4 182 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 NUDT21O43809 227 aaKnown RBP22.78■■□□□ 1.24
LSM7-203ENST00000585409 NUAK1O60285 661 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 UGT1A9O60656 530 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 CDK14O94921 469 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 UGT1A6P19224 532 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 UGT1A1P22309 533 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 UGT1A4P22310 534 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 IVDP26440 423 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 UGT1A3P35503 534 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 ARL4CP56559 192 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 CAV1Q03135 178 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 ACVR1Q04771 509 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 GPRC6AQ5T6X5 926 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 HIBCHQ6NVY1 386 aaPredicted RBP22.78■■□□□ 1.24
LSM7-203ENST00000585409 MARK2Q7KZI7 788 aaKnown RBP22.78■■□□□ 1.24
LSM7-203ENST00000585409 TAS2R42Q7RTR8 314 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 TAF8Q7Z7C8 310 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 ZSCAN1Q8NBB4 408 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 FAM46DQ8NEK8 389 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 OR6P1Q8NGX9 317 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 COPS8Q99627 209 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 OR2AG1Q9H205 316 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 UGT1A7Q9HAW7 530 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 UGT1A10Q9HAW8 530 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 UGT1A8Q9HAW9 530 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 MRPL40Q9NQ50 206 aaKnown RBP22.78■■□□□ 1.24
LSM7-203ENST00000585409 CHRAC1Q9NRG0 131 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 ZNHIT2Q9UHR6 403 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 SNX24Q9Y343 169 aa22.78■■□□□ 1.24
LSM7-203ENST00000585409 CCDC78A2IDD5 438 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 AGAP14A8MT82 685 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 GAPDHSO14556 408 aaPredicted RBP22.77■■□□□ 1.24
LSM7-203ENST00000585409 PFDN6O15212 129 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 GRID2O43424 1007 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 VCLP18206 1134 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 POLD2P49005 469 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 ITGA8P53708 1063 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 B4GALNT1Q00973 533 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 SRSF1Q07955 248 aaKnown RBP eCLIP22.77■■□□□ 1.243e-6■□□□□ 9.3
LSM7-203ENST00000585409 TMEM115Q12893 351 aaPredicted RBP22.77■■□□□ 1.24
LSM7-203ENST00000585409 GLE1Q53GS7 698 aaKnown RBP22.77■■□□□ 1.24
LSM7-203ENST00000585409 FASTKD1Q53R41 847 aaKnown RBP22.77■■□□□ 1.24
LSM7-203ENST00000585409 CERS6Q6ZMG9 384 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 ADGRG6Q86SQ4 1221 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 LRRTM4Q86VH4 590 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 NXPE1Q8N323 547 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 MMGT1Q8N4V1 131 aa22.77■■□□□ 1.24
LSM7-203ENST00000585409 OR13J1Q8NGT2 312 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms