RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 SMIM14Q96QK8 99 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 SRPK1Q96SB4 655 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 TIMM29Q9BSF4 260 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 GPR87Q9BY21 358 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 OR2AG1Q9H205 316 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 LHX9Q9NQ69 397 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 SMARCAL1Q9NZC9 954 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 PLEKHB1Q9UF11 243 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 EPHA6Q9UF33 1036 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 PCYOX1Q9UHG3 505 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 RARRES3Q9UL19 164 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 SPTBN1Q01082 2364 aaKnown RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 USP9YO00507 2555 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 hCG_1818297A0A087WSY0 165 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 BHMG1C9JSJ3 638 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 CHUKO15111 745 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 VEGFDO43915 354 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 KCNJ13O60928 360 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 ZNF7P17097 686 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 NR1D1P20393 614 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 SLC19A1P41440 591 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 HALP42357 657 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 CAPZBP47756 277 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 FNTAP49354 379 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 ARL4DP49703 201 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 PGDP52209 483 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 DCDC1P59894 354 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 RPS15P62841 145 aaKnown RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 SH3BP2P78314 561 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 ACY1Q03154 408 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 SEMA5AQ13591 1074 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 CCNG2Q16589 344 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 QPCTQ16769 361 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 CCDC70Q6NSX1 233 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 IRGCQ6NXR0 463 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 WDR93Q6P2C0 686 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 DRICH1Q6PGQ1 229 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 ABRAXAS1Q6UWZ7 409 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 WASH2PQ6VEQ5 465 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 BBS12Q6ZW61 710 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 MAATS1Q7Z4T9 603 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 TRAM1L1Q8N609 369 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 SIDT2Q8NBJ9 832 aaKnown RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 KCTD6Q8NC69 237 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 CCNYQ8ND76 341 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 ARRDC2Q8TBH0 407 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 CPT1CQ8TCG5 803 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 SSC4DQ8WTU2 575 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 KLHL6Q8WZ60 621 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 GLYATL1Q969I3 302 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 RNF25Q96BH1 459 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 SLC25A23Q9BV35 468 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 AP1M1Q9BXS5 423 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 FRMD8P1Q9BZ68 369 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 RAB33BQ9H082 229 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 ANKZF1Q9H8Y5 726 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 WASH6PQ9NQA3 447 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 ACSS2Q9NR19 701 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 CUEDC1Q9NWM3 386 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 OGFRQ9NZT2 677 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 FEZ2Q9UHY8 353 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 RAB21Q9UL25 225 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 PCDHGA9Q9Y5G4 932 aaKnown RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 PCYT1BQ9Y5K3 369 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 SLC30A1Q9Y6M5 507 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 FLNCQ14315 2725 aa10.54□□□□□ -0.72
CSNK1D-226ENST00000585026 BSNQ9UPA5 3926 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 TCRBV7S2A1N4TA0A589 114 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 LRRD1A4D1F6 860 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 MFSD11O43934 449 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 PHF2O75151 1096 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 CDK14O94921 469 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 DDAH2O95865 285 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 KRT1P04264 644 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 CD48P09326 243 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 NELFEP18615 380 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 MCM3P25205 808 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 LEPRP48357 1165 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 C2orf54Q08AI8 447 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 GTF2H3Q13889 308 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 DHX34Q14147 1143 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 DPYSL3Q14195 570 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 NAA30Q147X3 362 aaPredicted RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 ODF2Q5BJF6 829 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 TEX35Q5T0J7 233 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 AGAP9Q5VTM2 703 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 ALS2CLQ60I27 953 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 NCBP2-AS2Q69YL0 99 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 CAPRIN2Q6IMN6 1127 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 CRTC3Q6UUV7 619 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 ADGRG6Q86SQ4 1221 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 SYVN1Q86TM6 617 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 KMT5CQ86Y97 462 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 HPS6Q86YV9 775 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 EIF1ADQ8N9N8 165 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 TTC13Q8NBP0 860 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 BRSK1Q8TDC3 778 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 CT55Q8WUE5 264 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 TTC25Q96NG3 672 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 ZNF670Q9BS34 389 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms