RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 LENG8Q96PV6 779 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 GCNAQ96QF7 691 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 HGH1Q9BTY7 390 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ACAT2Q9BWD1 397 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 GPR88Q9GZN0 384 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 FBRSL1Q9HCM7 1045 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 XAB2Q9HCS7 855 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 DDX4Q9NQI0 724 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.93□□□□□ -2.15e-7■■■■□ 23.2
SMCHD1-211ENST00000584897 PRMT7Q9NVM4 692 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MKLN1Q9UL63 735 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TRPV2Q9Y5S1 764 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 IGKV6D-21A0A0A0MT36 114 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 GXYLT2A0PJZ3 443 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 OR6C68A6NDL8 312 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 GAGE10A6NGK3 116 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 BTBD18B2RXH4 712 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 E9PLN8 166 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF263O14978 683 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MSI1O43347 362 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TRAPPC3O43617 180 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MOCS3O95396 460 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 FYNP06241 537 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TPM2P07951 284 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CHN1P15882 459 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ANXA13P27216 316 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 YWHAQP27348 245 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 UBA7P41226 1012 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 LIMK1P53667 647 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 F2RL1P55085 397 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 RPL15P61313 204 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 RPS13P62277 151 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TPM4P67936 248 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TLE3Q04726 772 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 YWHAHQ04917 246 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CLCA4Q14CN2 919 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PLEKHS1Q5SXH7 462 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TEX35Q5T0J7 233 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ETFRF1Q6IPR1 90 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 NCEH1Q6PIU2 408 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CWC27Q6UX04 472 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CYB5R4Q7L1T6 521 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ARMCX2Q7L311 632 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PHLDB2Q86SQ0 1253 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 HOOK3Q86VS8 718 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ARID3BQ8IVW6 561 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM114A1Q8IWE2 563 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SFTPA1Q8IWL2 248 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 OR52L2PQ8NGH6 319 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ATP8B4Q8TF62 1192 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 DEPDC1BQ8WUY9 529 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CLMNQ96JQ2 1002 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 C1orf74Q96LT6 269 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 VKORC1Q9BQB6 163 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KIFC3Q9BVG8 833 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 GCOM2Q9BZD3 368 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CCSER1Q9C0I3 900 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF768Q9H5H4 540 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ASNSD1Q9NWL6 643 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 DDX43Q9NXZ2 648 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ETAA1Q9NY74 926 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 OGFRQ9NZT2 677 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CDH22Q9UJ99 828 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ANGPTL2Q9UKU9 493 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SMC3Q9UQE7 1217 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 NAALADL1Q9UQQ1 740 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PAM16Q9Y3D7 125 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 NLRC5Q86WI3 1866 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 BDP1A6H8Y1 2624 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TRAV34A0A0B4J273 112 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KLF18A0A0U1RQI7 1052 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PVALEFA0A1B0GWK0 134 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 LIPT2A6NK58 231 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC188H7C350 402 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM189-UBE2V1I3L0A0 370 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 LEFTY2O00292 366 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 DCLK1O15075 740 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 EIF3DO15371 548 aaKnown RBP eCLIP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 LRP3O75074 770 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CBFA2T3O75081 653 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 AVILO75366 819 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CNMDO75829 334 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MBD3O95983 291 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TIMP1P01033 207 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ALDOCP09972 364 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 HOXB8P17481 243 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 GTF2H1P32780 548 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 RPL9P32969 192 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP2C18P33260 490 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CPOXP36551 454 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PBX3P40426 434 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CAMPP49913 170 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CRYBB1P53674 252 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TIRAPP58753 221 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 POLR2FP61218 127 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 DYNLL1P63167 89 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SIM1P81133 766 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 MC2RQ01718 297 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 OCA2Q04671 838 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms