RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CACNG1Q06432 222 aa12.52□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CTSL3PQ5NE16 218 aa12.52□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ACAD11Q709F0 780 aa12.52□□□□□ -0.4
CDK5RAP3-217ENST00000580287 SNX31Q8N9S9 440 aa12.52□□□□□ -0.4
CDK5RAP3-217ENST00000580287 SLC26A7Q8TE54 656 aa12.52□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ALG9Q9H6U8 611 aa12.52□□□□□ -0.4
CDK5RAP3-217ENST00000580287 DENND4AQ7Z401 1863 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PRR23AA6NEV1 266 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ADRB3P13945 408 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 OGNP20774 298 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 COL9A1P20849 921 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ATP5F1P24539 256 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 P2RY2P41231 377 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ACOX1Q15067 660 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LPCAT4Q643R3 524 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PAQR3Q6TCH7 311 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 IZUMO2Q6UXV1 221 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LIPIQ6XZB0 460 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 DET1Q7L5Y6 550 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AADATQ8N5Z0 425 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AARSD1Q9BTE6 412 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SPATA16Q9BXB7 569 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CD93Q9NPY3 652 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CRLS1Q9UJA2 301 aa12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NDRG2Q9UN36 371 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-217ENST00000580287 MAGEC1O60732 1142 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RHOBTB1O94844 696 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 KLF8O95600 359 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ELFN1P0C7U0 828 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CHRM3P20309 590 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 DRD3P35462 400 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 MMP12P39900 470 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 KCNC1P48547 511 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PRKAA2P54646 552 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SMAD2Q15796 467 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LSM12Q3MHD2 195 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ARMC3Q5W041 872 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SNX20Q7Z614 316 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LSMEM2Q8N112 164 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 KDM1BQ8NB78 822 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SIDT2Q8NBJ9 832 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TMIEQ8NEW7 156 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FLCNQ8NFG4 579 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LRIG1Q96JA1 1093 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CATSPER2Q96P56 530 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LENG8Q96PV6 779 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GPR21Q99679 349 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RIOK2Q9BVS4 552 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CDYLQ9Y232 598 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 A0A1W2PP55 124 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 K7ESM1 405 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AIM2O14862 343 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SYNCRIPO60506 623 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TSPAN8P19075 237 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ITGB7P26010 798 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TTPAP49638 278 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TAGLNQ01995 201 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 KLF10Q13118 480 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TECRLQ5HYJ1 363 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LKAAEAR1Q8TD35 194 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GATA6Q92908 595 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SPACA7Q96KW9 195 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 DKK3Q9UBP4 350 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SUN2Q9UH99 717 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 APPL1Q9UKG1 709 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NUMA1Q14980 2115 aa12.51□□□□□ -0.41
CDK5RAP3-217ENST00000580287 A0A1B0GVG6 124 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 MAGEA13PA6NCF6 341 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FADS2P1A8MWK0 482 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 H3BMM5 538 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 INPP4BO15327 924 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GRID2O43424 1007 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 COX4I1P13073 169 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ITGALP20701 1170 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ITGAXP20702 1163 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CCDC68Q9H2F9 335 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FAM83DQ9H4H8 585 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 DYRK4Q9NR20 520 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 INTS10Q9NVR2 710 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 IKZF3Q9UKT9 509 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 A0A1W2PQF6 199 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 A8MT66 165 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 MAP3K7O43318 606 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 IPO13O94829 963 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TRIM16O95361 564 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RBP1P09455 135 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CYP2A6P11509 494 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PKMP14618 531 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FDXRP22570 491 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ACRV1P26436 265 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TNFRSF4P43489 277 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 B4GALNT1Q00973 533 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ENPP2Q13822 863 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ZRSR2Q15696 482 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CST6Q15828 149 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms