RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 CDK14O94921 469 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 ALPPP05187 535 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 HLA-DQB2P05538 268 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 PIRTP0C851 137 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 EDN3P14138 238 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 SOX8P57073 446 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 DCDC1P59894 354 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 SPNS3Q6ZMD2 512 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 RAB43Q86YS6 212 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 TRAM1L1Q8N609 369 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 NSMCE1Q8WV22 266 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 FAR1Q8WVX9 515 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 ZNF653Q96CK0 615 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 TRAPPC9Q96Q05 1148 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 WDR77Q9BQA1 342 aaPredicted RBP11.33□□□□□ -0.6
SNRPN-208ENST00000577565 ZSCAN5AQ9BUG6 496 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 RUBCNLQ9H714 662 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 ACTR5Q9H9F9 607 aaPredicted RBP11.33□□□□□ -0.6
SNRPN-208ENST00000577565 HRASLS2Q9NWW9 162 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 NFKBIL1Q9UBC1 381 aaPredicted RBP11.33□□□□□ -0.6
SNRPN-208ENST00000577565 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
SNRPN-208ENST00000577565 CFAP20Q9Y6A4 193 aaKnown RBP11.33□□□□□ -0.6
SNRPN-208ENST00000577565 MYO7BQ6PIF6 2116 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 ANKRD66B4E2M5 251 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 LDB2O43679 373 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 VEGFDO43915 354 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 RNF8O76064 485 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 CTSCP53634 463 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 GALNT3Q14435 633 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 PLCL1Q15111 1095 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 KLHL35Q6PF15 583 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 CLEC17AQ6ZS10 378 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 PPP1R32Q7Z5V6 425 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 CLEC1AQ8NC01 280 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 CCHCR1Q8TD31 782 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 HSPH1Q92598 858 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 RELTQ969Z4 430 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 PCDH18Q9HCL0 1135 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNRPN-208ENST00000577565 PARVAQ9NVD7 372 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 RBM22Q9NW64 420 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNRPN-208ENST00000577565 SOHLH2Q9NX45 425 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 P4HTMQ9NXG6 502 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 SHOC2Q9UQ13 582 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 TTLL3Q9Y4R7 772 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 DOCK10Q96BY6 2186 aa11.32□□□□□ -0.6
SNRPN-208ENST00000577565 SPG11Q96JI7 2443 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 DNHD1Q96M86 4753 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 CNTRLQ7Z7A1 2325 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 A0A1B0GUH1 482 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 A0A1W2PQJ5 194 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 CCDC78A2IDD5 438 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 OR6C74A6NCV1 312 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 SLC9B1P1A6NJY1 282 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 TMCO5BA8MYB1 307 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 TMEM150CB9EJG8 249 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 ALOX12BO75342 701 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 IPO13O94829 963 aaKnown RBP11.31□□□□□ -0.6
SNRPN-208ENST00000577565 SLC4A1P02730 911 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 RARAP10276 462 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 MTHFD1P11586 935 aaKnown RBP11.31□□□□□ -0.6
SNRPN-208ENST00000577565 BPIP17213 487 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 HOXB4P17483 251 aaPredicted RBP11.31□□□□□ -0.6
SNRPN-208ENST00000577565 DESP17661 470 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 ARL4AP40617 200 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 HALP42357 657 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 TSFMP43897 325 aaKnown RBP11.31□□□□□ -0.6
SNRPN-208ENST00000577565 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 KCNK10P57789 538 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 DMPKQ09013 629 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 GALNT2Q10471 571 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 NFE2L1Q14494 772 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 SSPNQ14714 243 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 ZNF630Q2M218 657 aaPredicted RBP11.31□□□□□ -0.6
SNRPN-208ENST00000577565 PDPK2PQ6A1A2 396 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 IGFL2Q6UWQ7 119 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 BNC2Q6ZN30 1099 aaPredicted RBP11.31□□□□□ -0.6
SNRPN-208ENST00000577565 TMC3Q7Z5M5 1100 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 TRAPPC5Q8IUR0 188 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 NXPE1Q8N323 547 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 PPP4R1Q8TF05 950 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 FER1L6-AS2Q96M78 137 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 TRIB3Q96RU7 358 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 INSM2Q96T92 566 aaPredicted RBP11.31□□□□□ -0.6
SNRPN-208ENST00000577565 NRTNQ99748 197 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 ZFYVE1Q9HBF4 777 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 NUP210LQ5VU65 1888 aa11.31□□□□□ -0.6
SNRPN-208ENST00000577565 H3BMH7 237 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 MATN3O15232 486 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 GPR39O43194 453 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 ZNF749O43361 778 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 UMODP07911 640 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 CD48P09326 243 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 CBSLP0DN79 551 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 ATP1A3P13637 1013 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 ST6GAL1P15907 406 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 CYP2A7P20853 494 aa11.3□□□□□ -0.6
SNRPN-208ENST00000577565 EEF1GP26641 437 aaKnown RBP11.3□□□□□ -0.6
SNRPN-208ENST00000577565 HTR1EP28566 365 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms