RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SLC52A3Q9NQ40 469 aa4.42□□□□□ -1.7
CDC27-216ENST00000574304 PNMA2Q9UL42 364 aa4.42□□□□□ -1.7
CDC27-216ENST00000574304 ITIH6Q6UXX5 1313 aa4.42□□□□□ -1.7
CDC27-216ENST00000574304 A0A0G2JLW4 131 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 TEX13DA0A0J9YY54 714 aaPredicted RBP4.41□□□□□ -1.7
CDC27-216ENST00000574304 DUXAA6NLW8 204 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 PTGES3LE9PB15 166 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 NTN3O00634 580 aaPredicted RBP4.41□□□□□ -1.7
CDC27-216ENST00000574304 AP3D1O14617 1153 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 TSHBP01222 138 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 ERVK-10P10266 1014 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 CAPN3P20807 821 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 KCNC3Q14003 757 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 FAM109BQ6ICB4 259 aaPredicted RBP4.41□□□□□ -1.7
CDC27-216ENST00000574304 MCEMP1Q8IX19 187 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 WBP2Q969T9 261 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 SKA1Q96BD8 255 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 SLC22A12Q96S37 553 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 LITAFQ99732 161 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 SMARCAD1Q9H4L7 1026 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 MBNL1Q9NR56 388 aaKnown RBP4.41□□□□□ -1.7
CDC27-216ENST00000574304 MIOSQ9NXC5 875 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 DNAJB4Q9UDY4 337 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 EXO1Q9UQ84 846 aaKnown RBP4.41□□□□□ -1.7
CDC27-216ENST00000574304 PCDHGA5Q9Y5G8 931 aa4.41□□□□□ -1.7
CDC27-216ENST00000574304 A0A1W2PR77 199 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 CLIC2O15247 247 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 NDUFS4O43181 175 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 GPR137BO60478 399 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 ZBED4O75132 1171 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 IGHV4-38-2P0DP08 117 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 NMBRP28336 390 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 CHRNB4P30926 498 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 HOXC8P31273 242 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 RXRGP48443 463 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 DRG2P55039 364 aaKnown RBP4.4□□□□□ -1.71
CDC27-216ENST00000574304 HILS1P60008 231 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 AIMP2Q13155 320 aaKnown RBP4.4□□□□□ -1.71
CDC27-216ENST00000574304 MFAP5Q13361 173 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 PPIGQ13427 754 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDC27-216ENST00000574304 DLG2Q15700 870 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 FASTKD5Q7L8L6 764 aaKnown RBP4.4□□□□□ -1.71
CDC27-216ENST00000574304 APLFQ8IW19 511 aaPredicted RBP4.4□□□□□ -1.71
CDC27-216ENST00000574304 TAS1R2Q8TE23 839 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 CHCHD6Q9BRQ6 235 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 ADPRHL2Q9NX46 363 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 C2CD2Q9Y426 696 aa4.4□□□□□ -1.71
CDC27-216ENST00000574304 LAS1LQ9Y4W2 734 aaKnown RBP4.4□□□□□ -1.71
CDC27-216ENST00000574304 VILLO15195 856 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 RSL1D1O76021 490 aaKnown RBP4.39□□□□□ -1.71
CDC27-216ENST00000574304 LDLRP01130 860 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 PRSS56P0CW18 603 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 CKMT2P17540 419 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 CBLP22681 906 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 PSMB10P40306 273 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 HSD17B4P51659 736 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 THOP1P52888 689 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 MRPS5P82675 430 aaKnown RBP4.39□□□□□ -1.71
CDC27-216ENST00000574304 IRF3Q14653 427 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 ADALQ6DHV7 355 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 KLC3Q6P597 504 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 C15orf39Q6ZRI6 1047 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 DENND5BQ6ZUT9 1274 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 GPALPP1Q8IXQ4 340 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 L3MBTL4Q8NA19 623 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 C1orf131Q8NDD1 294 aaKnown RBP4.39□□□□□ -1.71
CDC27-216ENST00000574304 TRIM58Q8NG06 486 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 TBC1D16Q8TBP0 767 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 SENP5Q96HI0 755 aaPredicted RBP4.39□□□□□ -1.71
CDC27-216ENST00000574304 CCDC34Q96HJ3 373 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 ZNF582Q96NG8 517 aaPredicted RBP4.39□□□□□ -1.71
CDC27-216ENST00000574304 HRH4Q9H3N8 390 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 SLA2Q9H6Q3 261 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 SYNCQ9H7C4 482 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 AMACRQ9UHK6 382 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 FLT1P17948 1338 aa4.39□□□□□ -1.71
CDC27-216ENST00000574304 LRRC72A6NJI9 287 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 MITFO75030 526 aaPredicted RBP4.38□□□□□ -1.71
CDC27-216ENST00000574304 H1F0P07305 194 aaKnown RBP4.38□□□□□ -1.71
CDC27-216ENST00000574304 MMP9P14780 707 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 PRLRP16471 622 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 EPHA2P29317 976 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 ALDH4A1P30038 563 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 PSMC4P43686 418 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 SUOXP51687 545 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 MFAP4P55083 255 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 SNRPEP62304 92 aaKnown RBP4.38□□□□□ -1.71
CDC27-216ENST00000574304 PMP22Q01453 160 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 PRKAA1Q13131 559 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 ALS2CLQ60I27 953 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 FAM53AQ6NSI3 398 aaPredicted RBP4.38□□□□□ -1.71
CDC27-216ENST00000574304 C4orf50Q6ZRC1 276 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 CRYBG2Q8N1P7 616 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 OR2T12Q8NG77 320 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 TAS2R14Q9NYV8 317 aa4.38□□□□□ -1.71
CDC27-216ENST00000574304 CYSRT1A8MQ03 144 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 HHLA1C9JL84 531 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 DOK2O60496 412 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 CD48P09326 243 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 GEMIN4P57678 1058 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms