RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 XAB2Q9HCS7 855 aaKnown RBP13.13□□□□□ -0.31
CCDC40-205ENST00000571028 FGF22Q9HCT0 170 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 NLE1Q9NVX2 485 aaPredicted RBP13.13□□□□□ -0.31
CCDC40-205ENST00000571028 SAMD15Q9P1V8 674 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 CRLS1Q9UJA2 301 aa13.13□□□□□ -0.31
CCDC40-205ENST00000571028 USP9XQ93008 2570 aaPredicted RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 ESYT3A0FGR9 886 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 CCDC162PA2VCL2 907 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 SDR42E2A6NKP2 422 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 TOR1BO14657 336 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 SRP72O76094 671 aaKnown RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 GOT2P00505 430 aaKnown RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 PYGLP06737 847 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 KELP23276 732 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 CCR10P46092 362 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 CDKN1CP49918 316 aaPredicted RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 PRAMEP78395 509 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 XIAPP98170 497 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 GUCY2DQ02846 1103 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 PEX6Q13608 980 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 MORF4L2Q15014 288 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 TRADDQ15628 312 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 FNBP1LQ5T0N5 605 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 HOOK3Q86VS8 718 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 NLRP8Q86W28 1048 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 RAVER1Q8IY67 606 aaKnown RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 MMGT1Q8N4V1 131 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 BBOF1Q8ND07 529 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 NAT14Q8WUY8 206 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 PTCD2Q8WV60 388 aaKnown RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 JPH3Q8WXH2 748 aaPredicted RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 USP7Q93009 1102 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 GLYATL1Q969I3 302 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 PDXPQ96GD0 296 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 CDKN2AIPNLQ96HQ2 116 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 PSMG3-AS1Q96PY0 264 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 RANBP9Q96S59 729 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 IL22Q9GZX6 179 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 LRRN3Q9H3W5 708 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 CARS2Q9HA77 564 aaKnown RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 FOXJ2Q9P0K8 574 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 TUBD1Q9UJT1 453 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 APPL1Q9UKG1 709 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 CNOT6Q9ULM6 557 aaKnown RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 PNMA8BQ9ULN7 279 aaPredicted RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 GPR34Q9UPC5 381 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 PRKAB1Q9Y478 270 aa13.12□□□□□ -0.31
CCDC40-205ENST00000571028 OAS3Q9Y6K5 1087 aaKnown RBP13.12□□□□□ -0.31
CCDC40-205ENST00000571028 COL27A1Q8IZC6 1860 aaPredicted RBP13.11□□□□□ -0.31
CCDC40-205ENST00000571028 PRSS38A1L453 326 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 MROH6A6NGR9 719 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 STMND1H3BQB6 276 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 GAPDHSO14556 408 aaPredicted RBP13.11□□□□□ -0.31
CCDC40-205ENST00000571028 TNFP01375 233 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 MLNP12872 115 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 WT1P19544 449 aaPredicted RBP13.11□□□□□ -0.31
CCDC40-205ENST00000571028 ITGALP20701 1170 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 TEAD1P28347 426 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 AKT1P31749 480 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 GNPDA1P46926 289 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 ARL4CP56559 192 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 DHX9Q08211 1270 aaKnown RBP13.11□□□□□ -0.31
CCDC40-205ENST00000571028 ITGA9Q13797 1035 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 DNAJC21Q5F1R6 531 aaKnown RBP13.11□□□□□ -0.31
CCDC40-205ENST00000571028 PHF19Q5T6S3 580 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 DUPD1Q68J44 220 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 CRTC3Q6UUV7 619 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 DET1Q7L5Y6 550 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 ATCAYQ86WG3 371 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 GKN2Q86XP6 184 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 PHYKPLQ8IUZ5 450 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 CCNJLQ8IV13 435 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 OTUD6BQ8N6M0 293 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 Q8N9G6 341 aaPredicted RBP13.11□□□□□ -0.31
CCDC40-205ENST00000571028 ZNF669Q96BR6 464 aaPredicted RBP13.11□□□□□ -0.31
CCDC40-205ENST00000571028 MFSD3Q96ES6 412 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 CLPBQ9H078 707 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 OR2AG1Q9H205 316 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 ZNHIT2Q9UHR6 403 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 RABGEF1Q9UJ41 708 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 TMPRSS11EQ9UL52 423 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 SUFUQ9UMX1 484 aa13.11□□□□□ -0.31
CCDC40-205ENST00000571028 TDRD6O60522 2096 aaKnown RBP13.11□□□□□ -0.31
CCDC40-205ENST00000571028 A0A1W2PQM1 296 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 CLEC18AA5D8T8 446 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 GOLGA8KD6RF30 607 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 GOLGA8TH3BQL2 631 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 VAPBO95292 243 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 CEACAM5P06731 702 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 HOXC4P09017 264 aaPredicted RBP13.1□□□□□ -0.31
CCDC40-205ENST00000571028 RHOXF2BP0C7M4 288 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 HK3P52790 923 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 PLTPP55058 493 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 NFATC2Q13469 925 aa13.1□□□□□ -0.31
CCDC40-205ENST00000571028 PLA2G4EQ3MJ16 856 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms