RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 DHX9Q08211 1270 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 SRSF6Q13247 344 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 GTF2H3Q13889 308 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 LRP8Q14114 963 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 GPR18Q14330 331 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 FASTKD3Q14CZ7 662 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 ST3GAL2Q16842 350 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 ANKRD20A4Q4UJ75 823 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 BCL7AQ4VC05 210 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 C3orf38Q5JPI3 329 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 UBAP2Q5T6F2 1119 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 PHF19Q5T6S3 580 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 IZUMO3Q5VZ72 239 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 ZDHHC20Q5W0Z9 365 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 C19orf48Q6RUI8 117 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 ABRAXAS1Q6UWZ7 409 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 RBM44Q6ZP01 1051 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 DENND6AQ8IWF6 608 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 GALNT15Q8N3T1 639 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 PPHLN1Q8NEY8 458 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 OR2L2Q8NH16 312 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 NCSTNQ92542 709 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 RSC1A1Q92681 617 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 NAT6Q93015 286 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 DCUN1D1Q96GG9 259 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 NAF1Q96HR8 494 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 PPP1R2P1Q96PQ5 205 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 XKR8Q9H6D3 395 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 SLC40A1Q9NP59 571 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 KCNK4Q9NYG8 393 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 ASIC3Q9UHC3 531 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 SOX13Q9UN79 622 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 AK5Q9Y6K8 562 aa9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 KMT2BQ9UMN6 2715 aaPredicted RBP9.61□□□□□ -0.87
GTF3C1-212ENST00000570129 ZFYVE26Q68DK2 2539 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 DNALI1O14645 258 aaPredicted RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 PRAMEF10O60809 474 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 XRCC1P18887 633 aaPredicted RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ITPKBP27987 946 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 FMO4P31512 558 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 CCR7P32248 378 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 EIF2S3P41091 472 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 PRLHRP49683 370 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ITGA8P53708 1063 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 GABREP78334 506 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 PDE1BQ01064 536 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 SLC7A5Q01650 507 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 DR1Q01658 176 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 PRKG2Q13237 762 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 CTBP1Q13363 440 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 SPIDRQ14159 915 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 NR1D2Q14995 579 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 BBS9Q3SYG4 887 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 GPR33Q49SQ1 333 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 CTSL3PQ5NE16 218 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 AGAP9Q5VTM2 703 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 CAPRIN2Q6IMN6 1127 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 CASC4Q6P4E1 433 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ZNF549Q6P9A3 640 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 CENPUQ71F23 418 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ANKMY2Q8IV38 441 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 LRRN4CLQ8ND94 238 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 MCUQ8NE86 351 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 SPATA4Q8NEY3 305 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ZCCHC14Q8WYQ9 949 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ZNF592Q92610 1267 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ZNF669Q96BR6 464 aaPredicted RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ULK4Q96C45 1275 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 CCDC74BQ96LY2 380 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 NAP1L3Q99457 506 aaPredicted RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 SLC38A3Q99624 504 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 SLC30A3Q99726 388 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 CCM2Q9BSQ5 444 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 OR52A5Q9H2C5 316 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 DPH5Q9H2P9 285 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 SARS2Q9NP81 518 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 IMP3Q9NV31 184 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 OCIAD1Q9NX40 245 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 BFARQ9NZS9 450 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 PLAGL1Q9UM63 463 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 RUVBL2Q9Y230 463 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 MAD1L1Q9Y6D9 718 aa9.6□□□□□ -0.87
GTF3C1-212ENST00000570129 ZFHX4Q86UP3 3567 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 SDR42E2A6NKP2 422 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 SRRM3A6NNA2 597 aaPredicted RBP9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 NIPSNAP2O75323 286 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 ZNF189O75820 626 aaPredicted RBP9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 S1PR4O95977 384 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 ERVK-10P10266 1014 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 GABRB3P28472 473 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 FASLGP48023 281 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 LSSP48449 732 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 INHBCP55103 352 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 PRAMEP78395 509 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 MPP1Q00013 466 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 TIAL1Q01085 375 aaKnown RBP eCLIP9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 DMPKQ09013 629 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 ABRQ12979 859 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 BIRC2Q13490 618 aa9.59□□□□□ -0.87
GTF3C1-212ENST00000570129 RTP5Q14D33 572 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms