RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 HHEXQ03014 270 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 KRT33BQ14525 404 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 SMAD1Q15797 465 aaKnown RBP15.68■□□□□ 0.1
RAB40C-208ENST00000564703 ZNF470Q6ECI4 717 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 KCNMB4Q86W47 210 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 C17orf82Q86X59 251 aaPredicted RBP15.68■□□□□ 0.1
RAB40C-208ENST00000564703 CILP2Q8IUL8 1156 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 ANKMY2Q8IV38 441 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 SFTPA2Q8IWL1 248 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 ZBED8Q8IZ13 594 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 CHCHD4Q8N4Q1 142 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 Q8N9G6 341 aaPredicted RBP15.68■□□□□ 0.1
RAB40C-208ENST00000564703 FBXO36Q8NEA4 188 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 PATE1Q8WXA2 126 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 ELMO1Q92556 727 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 CCDC74AQ96AQ1 378 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 PANX3Q96QZ0 392 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 SLC38A3Q99624 504 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 CCDC3Q9BQI4 270 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 FOXP3Q9BZS1 431 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 CCDC68Q9H2F9 335 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 SYNDIG1Q9H7V2 258 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 SARS2Q9NP81 518 aaKnown RBP15.68■□□□□ 0.1
RAB40C-208ENST00000564703 GRHL1Q9NZI5 618 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 CPNE7Q9UBL6 633 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 GNPTGQ9UJJ9 305 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 PSMD13Q9UNM6 376 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 PCDHB1Q9Y5F3 818 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 TEX264Q9Y6I9 313 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 PRSS21Q9Y6M0 314 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 PIKFYVEQ9Y2I7 2098 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 H3BMM5 538 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 IFRD1O00458 451 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 LIN7AO14910 233 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 KPNA5O15131 536 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 SGTAO43765 313 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 EML2O95834 649 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 ADRB1P08588 477 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 GPR3P46089 330 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 FASLGP48023 281 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 EIF3BP55884 814 aaKnown RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 RPA4Q13156 261 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 CRYMQ14894 314 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 SYTL3Q4VX76 610 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 HSP90AA5PQ58FG0 334 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 PERM1Q5SV97 790 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 CEP128Q6ZU80 1094 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 CCDC25Q86WR0 208 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 TMPRSS12Q86WS5 348 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 IGDCC3Q8IVU1 814 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 NOA1Q8NC60 698 aaKnown RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 GSDMBQ8TAX9 411 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 SLC37A2Q8TED4 501 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 IFT81Q8WYA0 676 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 CCDC97Q96F63 343 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 AHCYL2Q96HN2 611 aaKnown RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 TSPYL1Q9H0U9 437 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 SAYSD1Q9NPB0 183 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 IARS2Q9NSE4 1012 aaKnown RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 INTS10Q9NVR2 710 aaKnown RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 IL1RAPL1Q9NZN1 696 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 MTRF1LQ9UGC7 380 aaKnown RBP15.67■□□□□ 0.1
RAB40C-208ENST00000564703 CRYL1Q9Y2S2 319 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 ASXL3Q9C0F0 2248 aa15.67■□□□□ 0.1
RAB40C-208ENST00000564703 E7ESA3 106 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 PPM1DO15297 605 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 TP73O15350 636 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 DKK1O94907 266 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 ESR1P03372 595 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 APOA4P06727 396 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 ERVK-10P10266 1014 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 RPS3P23396 243 aaKnown RBP eCLIP15.66■□□□□ 0.1
RAB40C-208ENST00000564703 FMO4P31512 558 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 CBLBQ13191 982 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 CTBP1Q13363 440 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 SPIDRQ14159 915 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 BRD3Q15059 726 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 TYSND1Q2T9J0 566 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 UNC5AQ6ZN44 842 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 FAM83HQ6ZRV2 1179 aaPredicted RBP15.66■□□□□ 0.1
RAB40C-208ENST00000564703 RAB44Q7Z6P3 723 aaPredicted RBP15.66■□□□□ 0.1
RAB40C-208ENST00000564703 RBM12BQ8IXT5 1001 aaKnown RBP15.66■□□□□ 0.1
RAB40C-208ENST00000564703 FBXO25Q8TCJ0 367 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 ASZ1Q8WWH4 475 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 TMEM159Q96B96 161 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 CERS2Q96G23 380 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 C12orf66Q96MD2 445 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 GFM1Q96RP9 751 aaKnown RBP15.66■□□□□ 0.1
RAB40C-208ENST00000564703 FAM129AQ9BZQ8 928 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 WWP1Q9H0M0 922 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 LRRN3Q9H3W5 708 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 COG4Q9H9E3 785 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 KCNK4Q9NYG8 393 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 FBXO5Q9UKT4 447 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 HEBP2Q9Y5Z4 205 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 COLEC10Q9Y6Z7 277 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 RP1P56715 2156 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 KNTC1P50748 2209 aa15.66■□□□□ 0.1
RAB40C-208ENST00000564703 SPTBN2O15020 2390 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 ESYT3A0FGR9 886 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms