RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 A6NL46 340 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 CLIC2O15247 247 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 EPB41L2O43491 1005 aaKnown RBP4.39□□□□□ -1.71
UBR1-205ENST00000564540 TPPPO94811 219 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 GABRB1P18505 474 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 CRYBG2Q8N1P7 616 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 NGEFQ8N5V2 710 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 SRSF8Q9BRL6 282 aaKnown RBP4.39□□□□□ -1.71
UBR1-205ENST00000564540 SLA2Q9H6Q3 261 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 DNAJC18Q9H819 358 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 MIOSQ9NXC5 875 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 OGFRQ9NZT2 677 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 FBXL17Q9UF56 701 aa4.39□□□□□ -1.71
UBR1-205ENST00000564540 A0A087X0M5 115 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 A0A1B0GX30 115 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 ANTXRLA6NF34 631 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 MAGEB17A8MXT2 336 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 USO1O60763 962 aaKnown RBP4.38□□□□□ -1.71
UBR1-205ENST00000564540 TBX6O95947 436 aaPredicted RBP4.38□□□□□ -1.71
UBR1-205ENST00000564540 CKMT2P17540 419 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 NMBRP28336 390 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 CDH8P55286 799 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 PRAMEP78395 509 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 MAMLD1Q13495 774 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 TMEM154Q6P9G4 183 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 ZNF790Q6PG37 636 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 ZNF497Q6ZNH5 498 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 MFSD6Q6ZSS7 791 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 DENND5BQ6ZUT9 1274 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 TEX11Q8IYF3 940 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 SCYL3Q8IZE3 742 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 TMTC2Q8N394 836 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 ANKRD52Q8NB46 1076 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 OR2T12Q8NG77 320 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 ZNF582Q96NG8 517 aaPredicted RBP4.38□□□□□ -1.71
UBR1-205ENST00000564540 RHNO1Q9BSD3 238 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 FTOQ9C0B1 505 aaKnown RBP eCLIP4.38□□□□□ -1.71
UBR1-205ENST00000564540 DENND2DQ9H6A0 471 aaPredicted RBP4.38□□□□□ -1.71
UBR1-205ENST00000564540 SIX2Q9NPC8 291 aa4.38□□□□□ -1.71
UBR1-205ENST00000564540 IGKV3D-15A0A087WSY6 115 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 PGPEP1LA6NFU8 196 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 NR5A2O00482 541 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 GPR137BO60478 399 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 SCGB1D1O95968 90 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 CLTBP09497 229 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 LIFP15018 202 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 MFAP5Q13361 173 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 KIAA1644Q3SXP7 199 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 CCDC30Q5VVM6 783 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 FAAH2Q6GMR7 532 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 SH2D5Q6ZV89 423 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 CHST9Q7L1S5 443 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 TICAM1Q8IUC6 712 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 PLD3Q8IV08 490 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 ZNF485Q8NCK3 441 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 WDR20Q8TBZ3 569 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 SCFD2Q8WU76 684 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 TAF15Q92804 592 aaKnown RBP eCLIP4.37□□□□□ -1.71
UBR1-205ENST00000564540 SLC47A1Q96FL8 570 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 MPP4Q96JB8 637 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 SEPT11Q9NVA2 429 aaKnown RBP4.37□□□□□ -1.71
UBR1-205ENST00000564540 INTS10Q9NVR2 710 aaKnown RBP4.37□□□□□ -1.71
UBR1-205ENST00000564540 PNMA2Q9UL42 364 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 NENFQ9UMX5 172 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 KCNJ14Q9UNX9 436 aa4.37□□□□□ -1.71
UBR1-205ENST00000564540 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.37□□□□□ -1.71
UBR1-205ENST00000564540 A0A1W2PR77 199 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 PI4KAP2A4QPH2 592 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 GH2P01242 217 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 RB1P06400 928 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 RNF224P0DH78 156 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 ACP2P11117 423 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 ACADMP11310 421 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 TNFAIP3P21580 790 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 PON1P27169 355 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 TM4SF1P30408 202 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 PSMC4P43686 418 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 CRYMQ14894 314 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 DLG2Q15700 870 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 ZC2HC1BQ5TFG8 222 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 ALS2CLQ60I27 953 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 KLC3Q6P597 504 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 L3MBTL4Q8NA19 623 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 HDAC2Q92769 488 aaKnown RBP4.36□□□□□ -1.71
UBR1-205ENST00000564540 SLC22A12Q96S37 553 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 PCDHGA5Q9Y5G8 931 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 LYVE1Q9Y5Y7 322 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 STK36Q9NRP7 1315 aa4.36□□□□□ -1.71
UBR1-205ENST00000564540 A0A087X002 238 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 OR6C76A6NM76 312 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 ZNF821O75541 412 aaPredicted RBP4.35□□□□□ -1.71
UBR1-205ENST00000564540 IGLV1-44P01699 117 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 HOXA13P31271 388 aaPredicted RBP4.35□□□□□ -1.71
UBR1-205ENST00000564540 HADHAP40939 763 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 GARSP41250 739 aaKnown RBP4.35□□□□□ -1.71
UBR1-205ENST00000564540 DCAF7P61962 342 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 GAGE2BQ13066 116 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 TMEM187Q14656 261 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 GAGE2EQ4V326 116 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms