RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 F5H423 210 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-204ENST00000563739 MATN3O15232 486 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 HCRTR1O43613 425 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 MTA2O94776 668 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 SLC25A14O95258 325 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-204ENST00000563739 CTSBP07858 339 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 PTMSP20962 102 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 ARCN1P48444 511 aaKnown RBP10.1□□□□□ -0.79
SF3B3-204ENST00000563739 EPHB1P54762 984 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 HSD11B2P80365 405 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 CDK18Q07002 472 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 NCF4Q15080 339 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 ATP13A5Q4VNC0 1218 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 CCDC183Q5T5S1 534 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 MED25Q71SY5 747 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 ZNF571Q7Z3V5 609 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-204ENST00000563739 TMEM126BQ8IUX1 230 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 TMEM102Q8N9M5 508 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-204ENST00000563739 NAT14Q8WUY8 206 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 CXorf40BQ96DE9 158 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 BTBD6Q96KE9 485 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 TSGA13Q96PP4 275 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 ERGIC2Q96RQ1 377 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 SPATA16Q9BXB7 569 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 KCND1Q9NSA2 647 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 RBM22Q9NW64 420 aaKnown RBP eCLIP10.1□□□□□ -0.798e-7■■■■■ 34.1
SF3B3-204ENST00000563739 SHOC2Q9UQ13 582 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 ZNF711Q9Y462 761 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 CACNA1CQ13936 2221 aa10.1□□□□□ -0.79
SF3B3-204ENST00000563739 LRRTM2O43300 516 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 SGTAO43765 313 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 UMODP07911 640 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 VARSP26640 1264 aaKnown RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 ARL4AP40617 200 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 CD86P42081 329 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 GABRA4P48169 554 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 GBE1Q04446 702 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 DPYSL3Q14195 570 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 NFE2L1Q14494 772 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 MYBPC3Q14896 1274 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 LLGL1Q15334 1064 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 ATP13A4Q4VNC1 1196 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 ANKRD20A8PQ5CZ79 823 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 DNTTIP2Q5QJE6 756 aaKnown RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 PDPK2PQ6A1A2 396 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 SP5Q6BEB4 398 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 MICALCLQ6ZW33 695 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 PPP1R32Q7Z5V6 425 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 ZC3H18Q86VM9 953 aaKnown RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 BPHLQ86WA6 291 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 BBS5Q8N3I7 341 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 PQLC3Q8N755 202 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 RASGEF1AQ8N9B8 481 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 ENOX1Q8TC92 643 aaKnown RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 TEKT4Q8WW24 435 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 ZNF653Q96CK0 615 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 LURAP1Q96LR2 239 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 VPS35Q96QK1 796 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 INSM2Q96T92 566 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 CD180Q99467 661 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 ZSCAN5AQ9BUG6 496 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 TRIM8Q9BZR9 551 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 LIMA1Q9UHB6 759 aaKnown RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 POMT2Q9UKY4 750 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 PSMD13Q9UNM6 376 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 NOVA2Q9UNW9 492 aaKnown RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 CFAP20Q9Y6A4 193 aaKnown RBP10.09□□□□□ -0.79
SF3B3-204ENST00000563739 SPG11Q96JI7 2443 aa10.09□□□□□ -0.79
SF3B3-204ENST00000563739 CPAMD8Q8IZJ3 1885 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 VEGFDO43915 354 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 RNF8O76064 485 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 CDK14O94921 469 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 ZBTB11O95625 1053 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-204ENST00000563739 MTHFD1P11586 935 aaKnown RBP10.08□□□□□ -0.8
SF3B3-204ENST00000563739 ST6GAL1P15907 406 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 IDSP22304 550 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 SERPINB6P35237 376 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 SOX8P57073 446 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 GSDMDP57764 484 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 KRTAP10-9P60411 292 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 ITKQ08881 620 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 NOMO1Q15155 1222 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 DCAF10Q5QP82 559 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 ZFYVE27Q5T4F4 411 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 ZNF295-AS1Q8N0V1 137 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 GALNT16Q8N428 558 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 TTC30BQ8N4P2 665 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 LILRA3Q8N6C8 439 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-204ENST00000563739 NIPA2Q8N8Q9 360 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 ITLN2Q8WWU7 325 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-204ENST00000563739 FAF2Q96CS3 445 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 RMDN2Q96LZ7 410 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 SLX1AQ9BQ83 275 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 ZFYVE1Q9HBF4 777 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 FANCLQ9NW38 375 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 TMEM63CQ9P1W3 806 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 AMACRQ9UHK6 382 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 SLC24A2Q9UI40 661 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 OSGIN2Q9Y236 505 aa10.08□□□□□ -0.8
SF3B3-204ENST00000563739 COPG1Q9Y678 874 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms