RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CCDC162PA2VCL2 907 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 MGAT4DA6NG13 374 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 LILRA5A6NI73 299 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 HGSO14964 777 aaPredicted RBP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 RAD1O60671 282 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 FGGP02679 453 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 ATXN8OSP0DMR3 200 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF28P17035 718 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 PDHA2P29803 388 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 RPL22P35268 128 aaKnown RBP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 PREPP48147 710 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 EPHA4P54764 986 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 CSE1LP55060 971 aaKnown RBP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 SESN2P58004 480 aaPredicted RBP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 CRADDP78560 199 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 TRA2AQ13595 282 aaKnown RBP eCLIP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 KRT33BQ14525 404 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 KCNAB1Q14722 419 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 DBN1Q16643 649 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 P3H1Q32P28 736 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 CACHD1Q5VU97 1274 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 WDR74Q6RFH5 385 aaPredicted RBP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 XKR5Q6UX68 686 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 GSTA5Q7RTV2 222 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 ARHGAP22Q7Z5H3 698 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 SNX20Q7Z614 316 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 LDB1Q86U70 411 aaPredicted RBP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 PIANPQ8IYJ0 282 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 PHC3Q8NDX5 983 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 TMEM159Q96B96 161 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 ULK4Q96C45 1275 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 CDKN2AIPNLQ96HQ2 116 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 MS4A14Q96JA4 679 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 C9orf72Q96LT7 481 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 RMDN2Q96LZ7 410 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 PPM1MQ96MI6 270 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF778Q96MU6 729 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 TLR10Q9BXR5 811 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 SEMA4CQ9C0C4 833 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 ARNT2Q9HBZ2 717 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 SLC40A1Q9NP59 571 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 POT1Q9NUX5 634 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 NLE1Q9NVX2 485 aaPredicted RBP9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 ZDHHC3Q9NYG2 299 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 PCDHB11Q9Y5F2 797 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 LOC400499M0QZD8 3231 aa9.27□□□□□ -0.93
NSMCE1-203ENST00000562039 ZNF106Q9H2Y7 1883 aaKnown RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 OR6C74A6NCV1 312 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 CFAP99D6REC4 459 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 K7ENP7 123 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 PSMD3O43242 534 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 PPFIA2O75334 1257 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 GOT2P00505 430 aaKnown RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 APRTP07741 180 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 SLC35G4P0C7Q5 338 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 RALBP11234 206 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 MTHFD1P11586 935 aaKnown RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 ATP1B2P14415 290 aaPredicted RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 LIFP15018 202 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 MSNP26038 577 aaKnown RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 ACRV1P26436 265 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 HADHAP40939 763 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 UCNP55089 124 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 BASP1P80723 227 aaKnown RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 PDE1BQ01064 536 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 MC2RQ01718 297 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 DMPKQ09013 629 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 PRKG2Q13237 762 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 SQSTM1Q13501 440 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 CLPPQ16740 277 aaPredicted RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 DCAF12Q5T6F0 453 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 AGAP9Q5VTM2 703 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 METRNLQ641Q3 311 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 INO80CQ6PI98 192 aaPredicted RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 CES3Q6UWW8 571 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 PLXDC1Q8IUK5 500 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 KLHDC8BQ8IXV7 354 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 CACNA2D3Q8IZS8 1091 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 IL22RA1Q8N6P7 574 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 BMPERQ8N8U9 685 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 LMNTD1Q8N9Z9 388 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 OR2L2Q8NH16 312 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 STYXQ8WUJ0 223 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 EXTL1Q92935 676 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 NKD1Q969G9 470 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 HDAC10Q969S8 669 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 RTP4Q96DX8 246 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 OR6C1Q96RD1 312 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 FERD3LQ96RJ6 166 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 MAP3K3Q99759 626 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 DPYSL5Q9BPU6 564 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 KLHL25Q9H0H3 589 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 XKR8Q9H6D3 395 aa9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 TRMT1Q9NXH9 659 aaKnown RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 TTC7AQ9ULT0 858 aaPredicted RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 SMG1Q96Q15 3661 aaKnown RBP9.26□□□□□ -0.93
NSMCE1-203ENST00000562039 IGHV5-51A0A0C4DH38 117 aa9.25□□□□□ -0.93
NSMCE1-203ENST00000562039 LOC101059948A0A1B0GTJ6 334 aa9.25□□□□□ -0.93
NSMCE1-203ENST00000562039 TCRBV7S3A2A0A539 114 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms