RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 GPATCH2LQ9NWQ4 482 aa9.29□□□□□ -0.92
HERC1-210ENST00000560897 HRASLS2Q9NWW9 162 aa9.29□□□□□ -0.92
HERC1-210ENST00000560897 IFT80Q9P2H3 777 aaPredicted RBP9.29□□□□□ -0.92
HERC1-210ENST00000560897 ATXN10Q9UBB4 475 aa9.29□□□□□ -0.92
HERC1-210ENST00000560897 TNFRSF10DQ9UBN6 386 aa9.29□□□□□ -0.92
HERC1-210ENST00000560897 FBXL4Q9UKA2 621 aa9.29□□□□□ -0.92
HERC1-210ENST00000560897 EDARQ9UNE0 448 aa9.29□□□□□ -0.92
HERC1-210ENST00000560897 DDX3YO15523 660 aaKnown RBP9.28□□□□□ -0.92
HERC1-210ENST00000560897 VEGFDO43915 354 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 UQCRHP07919 91 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 ZNF7P17097 686 aaPredicted RBP9.28□□□□□ -0.92
HERC1-210ENST00000560897 DESP17661 470 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 CDH3P22223 829 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 RFC1P35251 1148 aaPredicted RBP9.28□□□□□ -0.92
HERC1-210ENST00000560897 PREPP48147 710 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 STC1P52823 247 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 PRKAA1Q13131 559 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 PDAP1Q13442 181 aaKnown RBP9.28□□□□□ -0.92
HERC1-210ENST00000560897 PTPRRQ15256 657 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 C3AR1Q16581 482 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 RALGPS1Q5JS13 557 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 ZNF569Q5MCW4 686 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 AGAP9Q5VTM2 703 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 TAF3Q5VWG9 929 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 CLEC9AQ6UXN8 241 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 WASH2PQ6VEQ5 465 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 PPP1R32Q7Z5V6 425 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 PRIMA1Q86XR5 153 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 RAVER1Q8IY67 606 aaKnown RBP9.28□□□□□ -0.92
HERC1-210ENST00000560897 GPR135Q8IZ08 494 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 CATSPER1Q8NEC5 780 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 OR1L3Q8NH93 324 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 DNAJB8Q8NHS0 232 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 NSMCE1Q8WV22 266 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 TRIM56Q9BRZ2 755 aaKnown RBP9.28□□□□□ -0.92
HERC1-210ENST00000560897 FAM83DQ9H4H8 585 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 NOD2Q9HC29 1040 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 CBX8Q9HC52 389 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 SLC6A20Q9NP91 592 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
HERC1-210ENST00000560897 COQ3Q9NZJ6 369 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 PKD2L2Q9NZM6 624 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 ABI3Q9P2A4 366 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 TINAGQ9UJW2 476 aa9.28□□□□□ -0.92
HERC1-210ENST00000560897 CNOT6Q9ULM6 557 aaKnown RBP9.28□□□□□ -0.92
HERC1-210ENST00000560897 MAP1AP78559 2803 aaPredicted RBP9.27□□□□□ -0.92
HERC1-210ENST00000560897 INTS1Q8N201 2190 aaKnown RBP9.27□□□□□ -0.92
HERC1-210ENST00000560897 AKAP6Q13023 2319 aa9.27□□□□□ -0.92
HERC1-210ENST00000560897 C2CD4BA6NLJ0 364 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 FAM171A2A8MVW0 826 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 FADS2P1A8MWK0 482 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 EEF2KO00418 725 aaKnown RBP9.27□□□□□ -0.93
HERC1-210ENST00000560897 ZNF749O43361 778 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 ALOX12BO75342 701 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 SLC25A14O95258 325 aaPredicted RBP9.27□□□□□ -0.93
HERC1-210ENST00000560897 RASAL1O95294 804 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 BRAFP15056 766 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 DNASE1P24855 282 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 AIF1P55008 147 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 MFAP5Q13361 173 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 PCOLCEQ15113 449 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 CDSNQ15517 529 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 NAA35Q5VZE5 725 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 TMEM198Q66K66 360 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 GBP6Q6ZN66 633 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 TRIM59Q8IWR1 403 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 EID3Q8N140 333 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 CCHCR1Q8TD31 782 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 CPA5Q8WXQ8 436 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 NRGNQ92686 78 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 NACC2Q96BF6 587 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 DHTKD1Q96HY7 919 aaPredicted RBP9.27□□□□□ -0.93
HERC1-210ENST00000560897 THOC3Q96J01 351 aaKnown RBP9.27□□□□□ -0.93
HERC1-210ENST00000560897 NSMCE3Q96MG7 304 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 ZNF599Q96NL3 588 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 TAAR6Q96RI8 345 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 LMF1Q96S06 567 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.27□□□□□ -0.93
HERC1-210ENST00000560897 TRIM39Q9HCM9 518 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 ARFGAP3Q9NP61 516 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 CDC23Q9UJX2 597 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 RCOR1Q9UKL0 485 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 PPIL1Q9Y3C6 166 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 FHOD1Q9Y613 1164 aa9.27□□□□□ -0.93
HERC1-210ENST00000560897 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 COL6A5A8TX70 2615 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 NBEAL1Q6ZS30 2694 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 NSD1Q96L73 2696 aaPredicted RBP9.26□□□□□ -0.93
HERC1-210ENST00000560897 FN1P02751 2386 aaKnown RBP9.26□□□□□ -0.93
HERC1-210ENST00000560897 A0A0J9YYE9 177 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 BICDL2A1A5D9 508 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 ANKRD62A6NC57 917 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 GADD45BO75293 160 aaPredicted RBP9.26□□□□□ -0.93
HERC1-210ENST00000560897 SMC2O95347 1197 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 MLYCDO95822 493 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 TRBC1P01850 177 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 MYBL2P10244 700 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 PYGMP11217 842 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 SLC9A1P19634 815 aa9.26□□□□□ -0.93
HERC1-210ENST00000560897 GPD1P21695 349 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms