RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 TMEM178BH3BS89 294 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 BUD23O43709 281 aaKnown RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 PPP1R3DO95685 299 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 TRUB2O95900 331 aaKnown RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 QDPRP09417 244 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 CCDC175P0C221 793 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 DANCRP0C864 163 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 FAM106CPP0CH98 169 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 HNRNPCL4P0DMR1 293 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 DAOP14920 347 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 PFKFB1P16118 471 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 GM2AP17900 193 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 POLR2CP19387 275 aaPredicted RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 DNASE1P24855 282 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 CCKBRP32239 447 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 CDKN2AP42771 156 aaKnown RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 THBS3P49746 956 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 DSCR9P59020 149 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 NANOS2P60321 138 aaKnown RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 POU5F1Q01860 360 aaKnown RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 SF3B4Q15427 424 aaKnown RBP eCLIP5.36□□□□□ -1.551e-8■□□□□ 10.3
MARK3-220ENST00000560417 TMEM35AQ53FP2 167 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 KRBOX4Q5JUW0 171 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 IL27RAQ6UWB1 636 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 FAM198BQ6UWH4 519 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 CREB3L2Q70SY1 520 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 ANKRD23Q86SG2 305 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 RBM23Q86U06 439 aaKnown RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 SPATA2LQ8IUW3 424 aaPredicted RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 ZNF441Q8N8Z8 693 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 LNX1Q8TBB1 728 aaPredicted RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 FIG4Q92562 907 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 PHF21AQ96BD5 680 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 ZBTB9Q96C00 473 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 CDCA5Q96FF9 252 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 BICD1Q96G01 975 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 ADGRG7Q96K78 797 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 FAM84BQ96KN1 310 aaPredicted RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 ZNF582Q96NG8 517 aaPredicted RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 LRMDAQ9H2I8 198 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 NOL11Q9H8H0 719 aaKnown RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 UBTD1Q9HAC8 227 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 EBF2Q9HAK2 575 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 PIH1D3Q9NQM4 214 aaKnown RBP5.36□□□□□ -1.55
MARK3-220ENST00000560417 KLHL1Q9NR64 748 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 RHCGQ9UBD6 479 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 TUBE1Q9UJT0 475 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 VDAC3Q9Y277 283 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 DLGAP4Q9Y2H0 992 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 YIPF1Q9Y548 306 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 CGNL1Q0VF96 1302 aa5.36□□□□□ -1.55
MARK3-220ENST00000560417 EDDM13A0A1B0GTR0 161 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 CTAGE9A4FU28 777 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 MAGEA13PA6NCF6 341 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 TSPY2A6NKD2 308 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 ANKRD66B4E2M5 251 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 ZNHIT1O43257 154 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 MED24O75448 989 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 SLCO2B1O94956 709 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 GCNT3O95395 438 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 HSPA4LO95757 839 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 CTAGE8P0CG41 777 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 TSPY3P0CV98 308 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 TSPY8P0CW00 308 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 GABRA5P31644 462 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 MATR3P43243 847 aaKnown RBP eCLIP5.35□□□□□ -1.554e-11■■■■□ 24.8
MARK3-220ENST00000560417 HNRNPKP61978 463 aaKnown RBP eCLIP5.35□□□□□ -1.558e-8■■□□□ 11.4
MARK3-220ENST00000560417 TSPY1Q01534 308 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 PNRC1Q12796 327 aaPredicted RBP5.35□□□□□ -1.55
MARK3-220ENST00000560417 SNTA1Q13424 505 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 GTF2H2Q13888 395 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 COG2Q14746 738 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 ARMC4Q5T2S8 1044 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 GCNT6Q5T4J0 391 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 RNASEH2BQ5TBB1 312 aaKnown RBP5.35□□□□□ -1.55
MARK3-220ENST00000560417 GTF2H2CQ6P1K8 395 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 RAD9BQ6WBX8 426 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 IQCHQ86VS3 1027 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 TMEM173Q86WV6 379 aaPredicted RBP5.35□□□□□ -1.55
MARK3-220ENST00000560417 VSIG1Q86XK7 387 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 KMT5CQ86Y97 462 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 CTAGE4Q8IX94 777 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 MAML2Q8IZL2 1156 aaPredicted RBP5.35□□□□□ -1.55
MARK3-220ENST00000560417 PI4KAP1Q8N8J0 262 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 EXD1Q8NHP7 514 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 BBS10Q8TAM1 723 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 PPP4R1Q8TF05 950 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 TMEM255BQ8WV15 326 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 RTP4Q96DX8 246 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 NEURL2Q9BR09 285 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 NAA11Q9BSU3 229 aaPredicted RBP5.35□□□□□ -1.55
MARK3-220ENST00000560417 HHATLQ9HCP6 504 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 CD93Q9NPY3 652 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 SH3GLB2Q9NR46 395 aa5.35□□□□□ -1.55
MARK3-220ENST00000560417 SCRIBQ14160 1630 aa5.34□□□□□ -1.55
MARK3-220ENST00000560417 ANKUB1A6NFN9 424 aa5.34□□□□□ -1.55
MARK3-220ENST00000560417 TMEM221A6NGB7 291 aa5.34□□□□□ -1.55
MARK3-220ENST00000560417 EIF3DO15371 548 aaKnown RBP eCLIP5.34□□□□□ -1.55
MARK3-220ENST00000560417 OR10H2O60403 315 aa5.34□□□□□ -1.55
MARK3-220ENST00000560417 WDR1O75083 606 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms