RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 MRNIPQ6NTE8 343 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 NEPROQ6NW34 567 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 C8orf74Q6P047 294 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 SPRED1Q7Z699 444 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 CACTIN-AS1Q8N1I8 211 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 NOA1Q8NC60 698 aaKnown RBP16.51■□□□□ 0.23
RPL28-209ENST00000560055 HM13Q8TCT9 377 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 CCM2Q9BSQ5 444 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 LRRC1Q9BTT6 524 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 SCNM1Q9BWG6 230 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 P2RY12Q9H244 342 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 VPS37BQ9H9H4 285 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 SARS2Q9NP81 518 aaKnown RBP16.51■□□□□ 0.23
RPL28-209ENST00000560055 IL1RAPL1Q9NZN1 696 aa16.51■□□□□ 0.23
RPL28-209ENST00000560055 ZNF624Q9P2J8 865 aaPredicted RBP16.51■□□□□ 0.23
RPL28-209ENST00000560055 ZZEF1O43149 2961 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 TRBV23OR9-2A0A075B6M9 112 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CTAGE15A4D2H0 777 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 PDZK1P1A8MUH7 402 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 BHMG1C9JSJ3 638 aaPredicted RBP16.5■□□□□ 0.23
RPL28-209ENST00000560055 PRMT5O14744 637 aaPredicted RBP16.5■□□□□ 0.23
RPL28-209ENST00000560055 CTAGE8P0CG41 777 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 XRCC1P18887 633 aaPredicted RBP16.5■□□□□ 0.23
RPL28-209ENST00000560055 RPS3P23396 243 aaKnown RBP eCLIP16.5■□□□□ 0.234e-30■□□□□ 9.6
RPL28-209ENST00000560055 ELK3P41970 407 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 GPR3P46089 330 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CLDN6P56747 220 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CALCOCO2Q13137 446 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 TRADDQ15628 312 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 LONRF1Q17RB8 773 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 HES3Q5TGS1 186 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 STEAP4Q687X5 459 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 ZDHHC24Q6UX98 284 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CTAGE6Q86UF2 777 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 TMPRSS12Q86WS5 348 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CILP2Q8IUL8 1156 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CCNJLQ8IV13 435 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CTAGE4Q8IX94 777 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 GALNT15Q8N3T1 639 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 LILRA3Q8N6C8 439 aaPredicted RBP16.5■□□□□ 0.23
RPL28-209ENST00000560055 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.5■□□□□ 0.239e-6■□□□□ 10.2
RPL28-209ENST00000560055 LPGAT1Q92604 370 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 ART4Q93070 314 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 TCF12Q99081 682 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CPNE7Q9UBL6 633 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 KLK13Q9UKR3 277 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 ACSL5Q9ULC5 683 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 CFAP47Q6ZTR5 3102 aa16.5■□□□□ 0.23
RPL28-209ENST00000560055 PTPRBP23467 1997 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 A0A1W2PQM1 296 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 RHPN2P1A8MT19 583 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 OR56A5P0C7T3 313 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 SLC19A1P41440 591 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 ADARP55265 1226 aaKnown RBP16.49■□□□□ 0.23
RPL28-209ENST00000560055 SLC7A5Q01650 507 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 HHEXQ03014 270 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 SPANXN3Q5MJ09 141 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 RNF187Q5TA31 235 aaPredicted RBP16.49■□□□□ 0.23
RPL28-209ENST00000560055 CENPUQ71F23 418 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 SDCCAG8Q86SQ7 713 aaPredicted RBP16.49■□□□□ 0.23
RPL28-209ENST00000560055 SLC9B2Q86UD5 537 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 LMNTD2Q8IXW0 634 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 CFAP206Q8IYR0 622 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 COL27A1Q8IZC6 1860 aaPredicted RBP16.49■□□□□ 0.23
RPL28-209ENST00000560055 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 DCBLD1Q8N8Z6 715 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 AVL9Q8NBF6 648 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 WDR48Q8TAF3 677 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 COG4Q9H9E3 785 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 C20orf96Q9NUD7 363 aaPredicted RBP16.49■□□□□ 0.23
RPL28-209ENST00000560055 CHMP2BQ9UQN3 213 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 CHD6Q8TD26 2715 aa16.49■□□□□ 0.23
RPL28-209ENST00000560055 CELSR3Q9NYQ7 3312 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 ZFHX4Q86UP3 3567 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 UNC13CQ8NB66 2214 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 OR52A4PA6NMU1 304 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 B4GAT1O43505 415 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 NDUFS3O75489 264 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 TCEA3O75764 348 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 FTH1P02794 183 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 CCL7P80098 99 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 CAV1Q03135 178 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 PDIA2Q13087 525 aaKnown RBP16.48■□□□□ 0.23
RPL28-209ENST00000560055 FRG1Q14331 258 aaKnown RBP16.48■□□□□ 0.23
RPL28-209ENST00000560055 FASTKD3Q14CZ7 662 aaKnown RBP16.48■□□□□ 0.23
RPL28-209ENST00000560055 ZNF470Q6ECI4 717 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 CAPRIN2Q6IMN6 1127 aaKnown RBP16.48■□□□□ 0.23
RPL28-209ENST00000560055 UNC5AQ6ZN44 842 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 LRRC6Q86X45 466 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 DENND6AQ8IWF6 608 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 OTUD6BQ8N6M0 293 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 FBXO25Q8TCJ0 367 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 BIRC8Q96P09 236 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 CARD6Q9BX69 1037 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 TMEM121BQ9BXQ6 578 aaPredicted RBP16.48■□□□□ 0.23
RPL28-209ENST00000560055 PHACTR1Q9C0D0 580 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 ABCG4Q9H172 646 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 OR52A5Q9H2C5 316 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 LRRN3Q9H3W5 708 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 UCK1Q9HA47 277 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms