RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 ZNF605Q86T29 641 aa17.36■□□□□ 0.37
HDDC3-205ENST00000559898 PLXDC1Q8IUK5 500 aa17.36■□□□□ 0.37
HDDC3-205ENST00000559898 CCDC112Q8NEF3 446 aa17.36■□□□□ 0.37
HDDC3-205ENST00000559898 TMEM121Q9BTD3 319 aa17.36■□□□□ 0.37
HDDC3-205ENST00000559898 HELZ2Q9BYK8 2649 aaKnown RBP17.35■□□□□ 0.37
HDDC3-205ENST00000559898 IGHV5-51A0A0C4DH38 117 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 C5orf60A6NFR6 353 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 IPO7O95373 1038 aaKnown RBP17.35■□□□□ 0.37
HDDC3-205ENST00000559898 TIAF1O95411 115 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 POLBP06746 335 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 ANKRD34CP0C6C1 535 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 ARCN1P48444 511 aaKnown RBP17.35■□□□□ 0.37
HDDC3-205ENST00000559898 RAB15P59190 212 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 ZDHHC20Q5W0Z9 365 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 METRNLQ641Q3 311 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 SLC35B2Q8TB61 432 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 HES6Q96HZ4 224 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 RMDN2Q96LZ7 410 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 OR6C1Q96RD1 312 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 ASPSCR1Q9BZE9 553 aa17.35■□□□□ 0.37
HDDC3-205ENST00000559898 ZNF768Q9H5H4 540 aaKnown RBP17.35■□□□□ 0.37
HDDC3-205ENST00000559898 IMP3Q9NV31 184 aaKnown RBP17.35■□□□□ 0.37
HDDC3-205ENST00000559898 AAR2Q9Y312 384 aaKnown RBP17.35■□□□□ 0.37
HDDC3-205ENST00000559898 TMEM184BQ9Y519 407 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-205ENST00000559898 OR51F1A6NGY5 319 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 C2orf81A6NN90 581 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 AGAP14A8MT82 685 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 POLR1CO15160 346 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-205ENST00000559898 RASSF9O75901 435 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 ETS1P14921 441 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 ATP1A2P50993 1020 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 NFATC3Q12968 1075 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 PRPSAP1Q14558 356 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 CACHD1Q5VU97 1274 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 CEACAM20Q6UY09 585 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 NLGN4XQ8N0W4 816 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 NLGN4YQ8NFZ3 816 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-205ENST00000559898 EPB41L1Q9H4G0 881 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 AKIRIN1Q9H9L7 192 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-205ENST00000559898 ARNT2Q9HBZ2 717 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 PIKFYVEQ9Y2I7 2098 aa17.34■□□□□ 0.37
HDDC3-205ENST00000559898 MGAT4DA6NG13 374 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 B8ZZF3 427 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 PPFIA2O75334 1257 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 PRKAR1AP10644 381 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 MTHFD1P11586 935 aaKnown RBP17.33■□□□□ 0.36
HDDC3-205ENST00000559898 FOLR1P15328 257 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 VCLP18206 1134 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 MC4RP32245 332 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 HALP42357 657 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 KIF5AQ12840 1032 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 POU6F1Q14863 301 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 ZNF658BQ4V348 819 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-205ENST00000559898 PRSS42Q7Z5A4 293 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 PIANPQ8IYJ0 282 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 NXPE1Q8N323 547 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 GLIS1Q8NBF1 620 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 AVL9Q8NBF6 648 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 GALNT6Q8NCL4 622 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 OR2L2Q8NH16 312 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 KLHL6Q8WZ60 621 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 CALR3Q96L12 384 aaKnown RBP17.33■□□□□ 0.36
HDDC3-205ENST00000559898 C12orf66Q96MD2 445 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 MAP3K3Q99759 626 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 ZCCHC2Q9C0B9 1178 aaKnown RBP17.33■□□□□ 0.36
HDDC3-205ENST00000559898 CRLS1Q9UJA2 301 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 PRSS21Q9Y6M0 314 aa17.33■□□□□ 0.36
HDDC3-205ENST00000559898 STK10O94804 968 aaKnown RBP17.32■□□□□ 0.36
HDDC3-205ENST00000559898 KIAA0754O94854 1291 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 OAS2P29728 719 aaKnown RBP17.32■□□□□ 0.36
HDDC3-205ENST00000559898 CDC25BP30305 580 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 GRIA1P42261 906 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 SEPT6Q14141 434 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 LONRF2Q1L5Z9 754 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 PARP6Q2NL67 630 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 BCL7AQ4VC05 210 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 CCDC38Q502W7 563 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 ARHGEF18Q6ZSZ5 1173 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 CFAP206Q8IYR0 622 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 TEFMQ96QE5 360 aaKnown RBP17.32■□□□□ 0.36
HDDC3-205ENST00000559898 RUFY1Q96T51 708 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 EPHA6Q9UF33 1036 aa17.32■□□□□ 0.36
HDDC3-205ENST00000559898 DNMT3AQ9Y6K1 912 aaPredicted RBP17.32■□□□□ 0.36
HDDC3-205ENST00000559898 CRTAMO95727 393 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 ITGB2P05107 769 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 FURINP09958 794 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 EBLN1P0CF75 366 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 PDHA2P29803 388 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 ZRANB3Q5FWF4 1079 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 CAPRIN2Q6IMN6 1127 aaKnown RBP17.31■□□□□ 0.36
HDDC3-205ENST00000559898 NAPRTQ6XQN6 538 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 SNX20Q7Z614 316 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 SERPINA9Q86WD7 417 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 CLDN19Q8N6F1 224 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 UBL4BQ8N7F7 174 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 ZSCAN1Q8NBB4 408 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 OR52K1Q8NGK4 314 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 C1orf54Q8WWF1 131 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 ARHGAP9Q9BRR9 750 aa17.31■□□□□ 0.36
HDDC3-205ENST00000559898 ULBP3Q9BZM4 244 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms