RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PAK4O96013 591 aaPredicted RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 SERPINB2P05120 415 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 PRSS1P07477 247 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 ABCB1P08183 1280 aaPredicted RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 HLA-DOBP13765 273 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 S1PR1P21453 382 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 CPT2P23786 658 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 PTAFRP25105 342 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 MARK3P27448 753 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 HOXC8P31273 242 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 TLX1P31314 330 aaPredicted RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 SHMT1P34896 483 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 MFAP4P55083 255 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 HNRNPH2P55795 449 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 EEF1A1P68104 462 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 AP1B1Q10567 949 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 SNTB1Q13884 538 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 SLMAPQ14BN4 828 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 MORF4L2Q15014 288 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 ZNF805Q5CZA5 627 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 EEF1A1P5Q5VTE0 462 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 GGNBP1Q5YKI7 109 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 PLA2G4FQ68DD2 849 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 PLEKHA7Q6IQ23 1121 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 ALKBH5Q6P6C2 394 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 LCTLQ6UWM7 567 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 GFRALQ6UXV0 394 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 GSTA5Q7RTV2 222 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 CATSPER4Q7RTX7 472 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 PIWIL3Q7Z3Z3 882 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 DSG4Q86SJ6 1040 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 TMEM219Q86XT9 240 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 FOXRED2Q8IWF2 684 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 SLC35F3Q8IY50 421 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 SPATA6LQ8N4H0 392 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 WDSUB1Q8N9V3 476 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 OR6J1Q8NGC5 347 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 MOSPD2Q8NHP6 518 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 HUS1BQ8NHY5 278 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 SETD6Q8TBK2 473 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 GRAPLQ8TC17 118 aaPredicted RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 SECISBP2LQ93073 1101 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 PTP4A1Q93096 173 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 CFAP57Q96MR6 1250 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 LRRC1Q9BTT6 524 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 ANKRD2Q9GZV1 360 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 OSGEPL1Q9H4B0 414 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 GPR108Q9NPR9 543 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 RRP7BPQ9NSQ0 103 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 TAAR2Q9P1P5 351 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 FBXL17Q9UF56 701 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 OSGIN1Q9UJX0 560 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 PADI1Q9ULC6 663 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 NENFQ9UMX5 172 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 ERVK-11Q9UQG0 969 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 PTRH2Q9Y3E5 179 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 LOXL2Q9Y4K0 774 aa3.61□□□□□ -1.83
SPG11-218ENST00000559754 PDS5AQ29RF7 1337 aaKnown RBP3.61□□□□□ -1.83
SPG11-218ENST00000559754 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 TRBC2A0A5B9 178 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 URADA6NGE7 173 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 EDIL3O43854 480 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 CYC1P08574 325 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 HOXB5P09067 269 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 KRT10P13645 584 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 HLA-DPA1P20036 260 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 ZNF131P52739 623 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 PDE1BQ01064 536 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 ALCAMQ13740 583 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 FRG1Q14331 258 aaKnown RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 ZNF674Q2M3X9 581 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 EIF2S3LQ2VIR3 472 aaKnown RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 C2orf76Q3KRA6 126 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 PARP10Q53GL7 1025 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 KRBOX4Q5JUW0 171 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 CCDC158Q5M9N0 1113 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 PDSS1Q5T2R2 415 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 CST9LP1Q5W188 147 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 TRAT1Q6PIZ9 186 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 FBXO46Q6PJ61 603 aaPredicted RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 GLDNQ6ZMI3 551 aaPredicted RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 KBTBD6Q86V97 674 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 TDRPQ86YL5 185 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 C1orf87Q8N0U7 546 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 MINDY1Q8N5J2 469 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 C10orf53Q8N6V4 93 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 KIF18AQ8NI77 898 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 GRK7Q8WTQ7 553 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 SLC20A1Q8WUM9 679 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 PSPC1Q8WXF1 523 aaKnown RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 SGCDQ92629 289 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 ABTB1Q969K4 478 aaPredicted RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 TMCO6Q96DC7 493 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 FER1L6-AS2Q96M78 137 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 DGAT2Q96PD7 388 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 FAM110AQ9BQ89 295 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 HINT3Q9NQE9 182 aaKnown RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 PDRG1Q9NUG6 133 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 WSB2Q9NYS7 404 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms