RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PCDHA7Q9UN72 937 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 YIPF1Q9Y548 306 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 IGLV5-37A0A075B6J1 123 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 IGLV5-52A0A0A0MRZ9 124 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 DDNO94850 711 aaPredicted RBP4.29□□□□□ -1.72
CASC4-206ENST00000558847 NTN1O95631 604 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 LDLRP01130 860 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 DAOP14920 347 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 KRT2P35908 639 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 CCR10P46092 362 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 PCYT1AP49585 367 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 LIMK1P53667 647 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 TERF1P54274 439 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 MLLT10P55197 1068 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 LINC00205P59089 165 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 GCNT6Q5T4J0 391 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 C6orf163Q5TEZ5 329 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 TEX38Q6PEX7 206 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 FAM198BQ6UWH4 519 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 ADHFE1Q8IWW8 467 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 BBS10Q8TAM1 723 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 TMEM255BQ8WV15 326 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 TANKQ92844 425 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 SECISBP2LQ93073 1101 aaKnown RBP4.29□□□□□ -1.72
CASC4-206ENST00000558847 PHF21BQ96EK2 531 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 ERO1AQ96HE7 468 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 RMDN2Q96LZ7 410 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 C3orf30Q96M34 536 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 LRRC3BQ96PB8 259 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 NEURL2Q9BR09 285 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 GOLPH3LQ9H4A5 285 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 CNOT10Q9H9A5 744 aaKnown RBP4.29□□□□□ -1.72
CASC4-206ENST00000558847 MRPL44Q9H9J2 332 aaKnown RBP4.29□□□□□ -1.72
CASC4-206ENST00000558847 VDAC3Q9Y277 283 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 PCDHAC2Q9Y5I4 1007 aa4.29□□□□□ -1.72
CASC4-206ENST00000558847 A0A1W2PP11 408 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ARHGEF37A1IGU5 675 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 OR5K3A6NET4 321 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ANKUB1A6NFN9 424 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 H0Y626 953 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 STX6O43752 255 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 POLR2CP19387 275 aaPredicted RBP4.28□□□□□ -1.72
CASC4-206ENST00000558847 S1PR1P21453 382 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ACHEP22303 614 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 SSTR2P30874 369 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 HOXC8P31273 242 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 HSPA4P34932 840 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 SEC61A1P61619 476 aaKnown RBP4.28□□□□□ -1.72
CASC4-206ENST00000558847 PLIN5Q00G26 463 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 PPARDQ03181 441 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ZNF155Q12901 538 aaPredicted RBP4.28□□□□□ -1.72
CASC4-206ENST00000558847 PLA2G7Q13093 441 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ZNF234Q14588 700 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 KLHL22Q53GT1 634 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ALS2CLQ60I27 953 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 RUSC1-AS1Q66K80 236 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ZNF517Q6ZMY9 492 aaPredicted RBP4.28□□□□□ -1.72
CASC4-206ENST00000558847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.28□□□□□ -1.72
CASC4-206ENST00000558847 FBXL14Q8N1E6 418 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 CLIP4Q8N3C7 705 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ACVR1CQ8NER5 493 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 OR5R1Q8NH85 324 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 SLC38A5Q8WUX1 472 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ROBO4Q8WZ75 1007 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 SMPDL3BQ92485 455 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 CDCA5Q96FF9 252 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 SYT17Q9BSW7 474 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ANKRD2Q9GZV1 360 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ALDH8A1Q9H2A2 487 aaPredicted RBP4.28□□□□□ -1.72
CASC4-206ENST00000558847 FKRPQ9H9S5 495 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 ZNF112Q9UJU3 913 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 PADI3Q9ULW8 664 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 B3GALT5Q9Y2C3 310 aa4.28□□□□□ -1.72
CASC4-206ENST00000558847 FLT1P17948 1338 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 A0A0B4J293 547 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 MED19A0JLT2 244 aaPredicted RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 OR2M5A3KFT3 312 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 CD8B2A6NJW9 211 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 ANXA2P2A6NMY6 339 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 PLK4O00444 970 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 TO15178 435 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 GPR137BO60478 399 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 SYNCRIPO60506 623 aaKnown RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 CLDN14O95500 239 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 DANCRP0C864 163 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 VDRP11473 427 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 DNASE1P24855 282 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 PSMA3P25788 255 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 ATP5DP30049 168 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 ARRB2P32121 409 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 CCKBRP32239 447 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 ASCL1P50553 236 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 BMXP51813 675 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 CAPZA1P52907 286 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 FOXG1P55316 489 aaPredicted RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 PRKCZQ05513 592 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 RBPJQ06330 500 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 DDR1Q08345 913 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 TWISTNBQ3B726 338 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms