RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MYBL2P10244 700 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 SDHBP21912 280 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 IDSP22304 550 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 RPL10P27635 214 aaKnown RBP17.13■□□□□ 0.33
TPM1-214ENST00000558544 TUBB4BP68371 445 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 DAB2P98082 770 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 KYNUQ16719 465 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 UBAP2Q5T6F2 1119 aaKnown RBP17.13■□□□□ 0.33
TPM1-214ENST00000558544 XKR5Q6UX68 686 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 CFAP206Q8IYR0 622 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 NAGSQ8N159 534 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 ARL10Q8N8L6 244 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 FAM181AQ8N9Y4 354 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 ELMO1Q92556 727 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 BIRC8Q96P09 236 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 COG4Q9H9E3 785 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 SMYD2Q9NRG4 433 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 U3KQA8 63 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 RP1P56715 2156 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 A6NCN8 305 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 F8W8V4 182 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 NIPSNAP2O75323 286 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 PIAS1O75925 651 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 TRIM16O95361 564 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 F3P13726 295 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 CSRP1P21291 193 aaKnown RBP17.12■□□□□ 0.33
TPM1-214ENST00000558544 TNFRSF8P28908 595 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 ABCG1P45844 678 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 LEPRP48357 1165 aaKnown RBP17.12■□□□□ 0.33
TPM1-214ENST00000558544 ADARP55265 1226 aaKnown RBP17.12■□□□□ 0.33
TPM1-214ENST00000558544 DNAJC3Q13217 504 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 BOP1Q14137 746 aaKnown RBP17.12■□□□□ 0.33
TPM1-214ENST00000558544 ZNF658BQ4V348 819 aaPredicted RBP17.12■□□□□ 0.33
TPM1-214ENST00000558544 CNSTQ6PJW8 725 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 OGFOD3Q6PK18 319 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 NAPRTQ6XQN6 538 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 RELL1Q8IUW5 271 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 GPR156Q8NFN8 814 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 UBXN4Q92575 508 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 GLMNQ92990 594 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 CDC6Q99741 560 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 TSSK1BQ9BXA7 367 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 PSMD13Q9UNM6 376 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 PCDHB1Q9Y5F3 818 aa17.12■□□□□ 0.33
TPM1-214ENST00000558544 SPTBN4Q9H254 2564 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 CNOT1A5YKK6 2376 aaKnown RBP17.11■□□□□ 0.33
TPM1-214ENST00000558544 TRBV23OR9-2A0A075B6M9 112 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 C17orf113A0A1B0GUU1 675 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 DCDC2BA2VCK2 349 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 KLHL33A6NCF5 533 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 SPAG6O75602 509 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 ESR1P03372 595 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 FAM153BP0C7A2 387 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 PKMP14618 531 aaKnown RBP17.11■□□□□ 0.33
TPM1-214ENST00000558544 GABRB3P28472 473 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 NOVA1P51513 510 aaKnown RBP17.11■□□□□ 0.33
TPM1-214ENST00000558544 MAZP56270 477 aaKnown RBP17.11■□□□□ 0.33
TPM1-214ENST00000558544 BRD3Q15059 726 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 NR0B2Q15466 257 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 TRIP6Q15654 476 aaKnown RBP17.11■□□□□ 0.33
TPM1-214ENST00000558544 ERCC6LQ2NKX8 1250 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 FAM153CQ494X1 144 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 C14orf28Q4W4Y0 310 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 METRNLQ641Q3 311 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 KIAA0408Q6ZU52 694 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 SLC37A2Q8TED4 501 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 FBF1Q8TES7 1133 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 FAM136AQ96C01 138 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 PANX3Q96QZ0 392 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 CCDC68Q9H2F9 335 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 DLL3Q9NYJ7 618 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 SCHIP1Q9P0W5 487 aaPredicted RBP17.11■□□□□ 0.33
TPM1-214ENST00000558544 WDR37Q9Y2I8 494 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 PSAT1Q9Y617 370 aa17.11■□□□□ 0.33
TPM1-214ENST00000558544 ASXL3Q9C0F0 2248 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 CXorf49A8MYA2 514 aaPredicted RBP17.1■□□□□ 0.33
TPM1-214ENST00000558544 GIPC1O14908 333 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 ACSL3O95573 720 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 AHSGP02765 367 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 GSTM1P09488 218 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 CKMT1AP12532 417 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 BRAFP15056 766 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 KCNA4P22459 653 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 STX2P32856 288 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 PREPP48147 710 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 CD151P48509 253 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 CSE1LP55060 971 aaKnown RBP17.1■□□□□ 0.33
TPM1-214ENST00000558544 VSNL1P62760 191 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 GSTM4Q03013 218 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 SLMAPQ14BN4 828 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 SYTL3Q4VX76 610 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 GUSBP11Q6P575 273 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 ZNF549Q6P9A3 640 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 ZNF449Q6P9G9 518 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 GALNT7Q86SF2 657 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 MAPK15Q8TD08 544 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 CDKL2Q92772 493 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 WWP1Q9H0M0 922 aa17.1■□□□□ 0.33
TPM1-214ENST00000558544 SARS2Q9NP81 518 aaKnown RBP17.1■□□□□ 0.33
TPM1-214ENST00000558544 SPAARA0A1B0GVQ0 90 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms