RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 FERMT1Q9BQL6 677 aa15.55■□□□□ 0.08
TUBB3-213ENST00000557262 C10orf88Q9H8K7 445 aa15.55■□□□□ 0.08
TUBB3-213ENST00000557262 ZNF71Q9NQZ8 489 aaPredicted RBP15.55■□□□□ 0.08
TUBB3-213ENST00000557262 LNPEPQ9UIQ6 1025 aa15.55■□□□□ 0.08
TUBB3-213ENST00000557262 KCND3Q9UK17 655 aa15.55■□□□□ 0.08
TUBB3-213ENST00000557262 CROTQ9UKG9 612 aa15.55■□□□□ 0.08
TUBB3-213ENST00000557262 TFR2Q9UP52 801 aa15.55■□□□□ 0.08
TUBB3-213ENST00000557262 KCTD3Q9Y597 815 aa15.55■□□□□ 0.08
TUBB3-213ENST00000557262 IGHV5-51A0A0C4DH38 117 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 KLHL33A6NCF5 533 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 C5orf60A6NFR6 353 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 MGAT4DA6NG13 374 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 KATNA1O75449 491 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 RECKO95980 971 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 AKT1P31749 480 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 ERV3-1Q14264 604 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 ATP1A1-AS1Q5TC04 95 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 CCDC181Q5TID7 509 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 DAAM2Q86T65 1068 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 GPR150Q8NGU9 434 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 ZFPM2Q8WW38 1151 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 KRT35Q92764 455 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 INSM2Q96T92 566 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-213ENST00000557262 FICDQ9BVA6 458 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 TRIM5Q9C035 493 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 GBA3Q9H227 469 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 ASB8Q9H765 288 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 LUC7LQ9NQ29 371 aaKnown RBP15.54■□□□□ 0.08
TUBB3-213ENST00000557262 RARRES3Q9UL19 164 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 ACSL5Q9ULC5 683 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 EFR3BQ9Y2G0 817 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 AAR2Q9Y312 384 aaKnown RBP15.54■□□□□ 0.08
TUBB3-213ENST00000557262 ARL5AQ9Y689 179 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 KCNMB2Q9Y691 235 aa15.54■□□□□ 0.08
TUBB3-213ENST00000557262 SRP72O76094 671 aaKnown RBP15.53■□□□□ 0.08
TUBB3-213ENST00000557262 PRAMEF1O95521 474 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 MTHFD1P11586 935 aaKnown RBP15.53■□□□□ 0.08
TUBB3-213ENST00000557262 FOLR1P15328 257 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 PBLDP30039 288 aaPredicted RBP15.53■□□□□ 0.08
TUBB3-213ENST00000557262 ADRA1AP35348 466 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 CYLC1P35663 651 aaPredicted RBP15.53■□□□□ 0.08
TUBB3-213ENST00000557262 CASRP41180 1078 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 PPP1CAP62136 330 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 ACY1Q03154 408 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 PRPSAP1Q14558 356 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 PLCL1Q15111 1095 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 SARM1Q6SZW1 724 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 DET1Q7L5Y6 550 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 KMT5CQ86Y97 462 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 OR4K2Q8NGD2 314 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 OR2L2Q8NH16 312 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 CD180Q99467 661 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 MAP3K3Q99759 626 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 GORASP1Q9BQQ3 440 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 WWP1Q9H0M0 922 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 LHX9Q9NQ69 397 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 IMP3Q9NV31 184 aaKnown RBP15.53■□□□□ 0.08
TUBB3-213ENST00000557262 HRASLS2Q9NWW9 162 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 POLHQ9Y253 713 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 PCDHGA6Q9Y5G7 932 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 PCDHA3Q9Y5H8 950 aa15.53■□□□□ 0.08
TUBB3-213ENST00000557262 UBA6A0AVT1 1052 aaPredicted RBP15.52■□□□□ 0.08
TUBB3-213ENST00000557262 OR5K3A6NET4 321 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 CREG1O75629 220 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 PYGMP11217 842 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 ARL4DP49703 201 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 PDE1BQ01064 536 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 OTUD4Q01804 1114 aaKnown RBP15.52■□□□□ 0.08
TUBB3-213ENST00000557262 TUBB3Q13509 450 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 ANKRD20A2Q5SQ80 823 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 ANKRD20A1Q5TYW2 823 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 ANKRD20A3Q5VUR7 823 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 PWWP2BQ6NUJ5 590 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 ACTL9Q8TC94 416 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 COL26A1Q96A83 441 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 CALR3Q96L12 384 aaKnown RBP15.52■□□□□ 0.08
TUBB3-213ENST00000557262 LINC00615Q96LM1 132 aaPredicted RBP15.52■□□□□ 0.08
TUBB3-213ENST00000557262 C12orf66Q96MD2 445 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 EPN3Q9H201 632 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 FKBPLQ9UIM3 349 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 CFAP20Q9Y6A4 193 aaKnown RBP15.52■□□□□ 0.08
TUBB3-213ENST00000557262 COL12A1Q99715 3063 aa15.52■□□□□ 0.08
TUBB3-213ENST00000557262 UBR5O95071 2799 aaPredicted RBP15.52■□□□□ 0.07
TUBB3-213ENST00000557262 PIPSLA2A3N6 862 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 TLCD2A6NGC4 264 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 AGAP14A8MT82 685 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 TIAF1O95411 115 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 CRTAMO95727 393 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 FURINP09958 794 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 RBP3P10745 1247 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 CTNNA2P26232 953 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 CTNNA1P35221 906 aaKnown RBP15.51■□□□□ 0.07
TUBB3-213ENST00000557262 EIF3EP60228 445 aaKnown RBP15.51■□□□□ 0.07
TUBB3-213ENST00000557262 HSD11B2P80365 405 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 XIAPP98170 497 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 MSLNQ13421 630 aaPredicted RBP15.51■□□□□ 0.07
TUBB3-213ENST00000557262 DNASE1L3Q13609 305 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 KCNAB1Q14722 419 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 BCL7AQ4VC05 210 aa15.51■□□□□ 0.07
TUBB3-213ENST00000557262 LACTB2Q53H82 288 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms