RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 CHST13Q8NET6 341 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 AKAP1Q92667 903 aaKnown RBP eCLIP8.47□□□□□ -1.05
MARK3-210ENST00000556463 PEX13Q92968 403 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 ZNF419Q96HQ0 510 aaPredicted RBP8.47□□□□□ -1.05
MARK3-210ENST00000556463 RDH12Q96NR8 316 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 MUS81Q96NY9 551 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 LPIN3Q9BQK8 851 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 CLSTN3Q9BQT9 956 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 CXCL16Q9H2A7 254 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 AKTIPQ9H8T0 292 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 FBRSL1Q9HCM7 1045 aaKnown RBP8.47□□□□□ -1.05
MARK3-210ENST00000556463 HPS4Q9NQG7 708 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 POLR3BQ9NW08 1133 aaPredicted RBP8.47□□□□□ -1.05
MARK3-210ENST00000556463 CD274Q9NZQ7 290 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 KLHL8Q9P2G9 620 aaPredicted RBP8.47□□□□□ -1.05
MARK3-210ENST00000556463 UBA2Q9UBT2 640 aaPredicted RBP8.47□□□□□ -1.05
MARK3-210ENST00000556463 USP21Q9UK80 565 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 NEU3Q9UQ49 428 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 GOLGB1Q14789 3259 aaKnown RBP8.47□□□□□ -1.05
MARK3-210ENST00000556463 RGS13O14921 159 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 HPRP00739 348 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 NTRK1P04629 796 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 ERCC2P18074 760 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 ATF6P18850 670 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 CBLP22681 906 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 CCNCP24863 283 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 HTR1BP28222 390 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 BMPR1AP36894 532 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 OR3A3P47888 321 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 GPLD1P80108 840 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 ABATP80404 500 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 ACAP2Q15057 778 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 Q3C1V9 767 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 ALKAL1Q6UXT8 129 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 LRRC52Q8N7C0 313 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 RPL10LQ96L21 214 aaKnown RBP8.47□□□□□ -1.05
MARK3-210ENST00000556463 FUNDC2Q9BWH2 189 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 ELOVL6Q9H5J4 265 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 STARD7Q9NQZ5 370 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 BTBD3Q9Y2F9 522 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 KLHL20Q9Y2M5 609 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 DNAJC15Q9Y5T4 150 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 SNX8Q9Y5X2 465 aa8.47□□□□□ -1.05
MARK3-210ENST00000556463 BRWD3Q6RI45 1802 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 SOWAHBA6NEL2 793 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 OR6C70A6NIJ9 312 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 SLC22A1O15245 554 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 PSMD3O43242 534 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 GABARAPO95166 117 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 ARF4P18085 180 aaPredicted RBP8.46□□□□□ -1.05
MARK3-210ENST00000556463 NFKB1P19838 968 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 HTR1EP28566 365 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 ALDH3A2P51648 485 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 BLVRAP53004 296 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 EPS8Q12929 822 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 GPR68Q15743 365 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 UNC50Q53HI1 259 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 FAM219BQ5XKK7 198 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 CCBE1Q6UXH8 406 aaPredicted RBP8.46□□□□□ -1.05
MARK3-210ENST00000556463 KIAA0408Q6ZU52 694 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 METTL23Q86XA0 190 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 DCP1BQ8IZD4 617 aaKnown RBP8.46□□□□□ -1.05
MARK3-210ENST00000556463 SPATA6LQ8N4H0 392 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 CELF2-AS1Q8N7Q2 184 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 BEND7Q8N7W2 519 aaPredicted RBP8.46□□□□□ -1.05
MARK3-210ENST00000556463 DNAAF3Q8N9W5 541 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 CCNYQ8ND76 341 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 KCTD13Q8WZ19 329 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 RIT1Q92963 219 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 ZNF566Q969W8 418 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 C19orf60Q96EN9 201 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 KCTD14Q9BQ13 255 aaPredicted RBP8.46□□□□□ -1.05
MARK3-210ENST00000556463 PIGVQ9NUD9 493 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 TMEM45AQ9NWC5 275 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 GJD2Q9UKL4 321 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 MAN2B2Q9Y2E5 1009 aa8.46□□□□□ -1.05
MARK3-210ENST00000556463 LOC100506127A0A0U1RQW1 187 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 RAB19A4D1S5 217 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 CCDC182A6NF36 153 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 SAGE2PA6NJ88 616 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 C16orf96A6NNT2 1141 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 EVPLLA8MZ36 301 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 B8ZZF3 427 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 BTN3A3O00478 584 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 GNGT2O14610 69 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 PPEF2O14830 753 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 ARIH2O95376 493 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 TPH1P17752 444 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 ADRA1BP35368 520 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 KCNC1P48547 511 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 SLC26A2P50443 739 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 KPNA2P52292 529 aaKnown RBP8.46□□□□□ -1.06
MARK3-210ENST00000556463 RHAGQ02094 409 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 SERINC3Q13530 473 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 TBRG1Q3YBR2 411 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 KANK2Q63ZY3 851 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 KIAA0930Q6ICG6 404 aaPredicted RBP8.46□□□□□ -1.06
MARK3-210ENST00000556463 NAPEPLDQ6IQ20 393 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 TMEM207Q6UWW9 146 aa8.46□□□□□ -1.06
MARK3-210ENST00000556463 FAM35AQ86V20 835 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms