RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GALNT16Q8N428 558 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 ANKRD20A12PQ8NF67 263 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 LRRN4Q8WUT4 740 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 MAML1Q92585 1016 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 INPP5DQ92835 1189 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 EID2BQ96D98 161 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 FER1L6-AS2Q96M78 137 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 CLSTN2Q9H4D0 955 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 AMACRQ9UHK6 382 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 ITGB1BP2Q9UKP3 347 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 PCDHGA10Q9Y5H3 936 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 CFAP20Q9Y6A4 193 aaKnown RBP13.59□□□□□ -0.23
ACTN1-219ENST00000556432 OR6C74A6NCV1 312 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 LDB2O43679 373 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.24
ACTN1-219ENST00000556432 CDH3P22223 829 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 PBLDP30039 288 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-219ENST00000556432 RORAP35398 523 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
ACTN1-219ENST00000556432 GALNT2Q10471 571 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 MMRN1Q13201 1228 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
ACTN1-219ENST00000556432 CUZD1Q86UP6 607 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 AMZ2Q86W34 360 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 PPM1MQ96MI6 270 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 IP6K3Q96PC2 410 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
ACTN1-219ENST00000556432 PCMTD2Q9NV79 361 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 COPG2Q9UBF2 871 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 ZNF711Q9Y462 761 aa13.58□□□□□ -0.24
ACTN1-219ENST00000556432 SPTBP11277 2137 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 MAP3K7O43318 606 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 CAPN1P07384 714 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 MTHFD1P11586 935 aaKnown RBP13.57□□□□□ -0.24
ACTN1-219ENST00000556432 AGXTP21549 392 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 CCNCP24863 283 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 CA5AP35218 305 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 GJC1P36383 396 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 KPNA2P52292 529 aaKnown RBP13.57□□□□□ -0.24
ACTN1-219ENST00000556432 ADCY2Q08462 1091 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 TMEM115Q12893 351 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-219ENST00000556432 DCAF10Q5QP82 559 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 CDKAL1Q5VV42 579 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 TXNRD3NBQ6F5E7 133 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 IGFL3Q6UXB1 125 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 C11orf96Q7Z7L8 435 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 FJX1Q86VR8 437 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 CCNYQ8ND76 341 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 OR1L3Q8NH93 324 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 TEKT4Q8WW24 435 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 ZCCHC2Q9C0B9 1178 aaKnown RBP13.57□□□□□ -0.24
ACTN1-219ENST00000556432 GPN3Q9UHW5 284 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-219ENST00000556432 BTRCQ9Y297 605 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 SVILO95425 2214 aa13.57□□□□□ -0.24
ACTN1-219ENST00000556432 MDC1Q14676 2089 aaKnown RBP13.57□□□□□ -0.24
ACTN1-219ENST00000556432 HEATR9A2RTY3 570 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 POP7O75817 140 aaKnown RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 IGHEP01854 428 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 BPIP17213 487 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 POLR2CP19387 275 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 HLA-DPA1P20036 260 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 FOLR3P41439 243 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 PREPP48147 710 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 PRKAA1Q13131 559 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 KRT33BQ14525 404 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 PCSK7Q16549 785 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 CRB2Q5IJ48 1285 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 MLIPQ5VWP3 458 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 NCBP2-AS2Q69YL0 99 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 DUS1LQ6P1R4 473 aaKnown RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 FAM83HQ6ZRV2 1179 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 Q6ZS92 163 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 GDF7Q7Z4P5 450 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 KCNMB4Q86W47 210 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 ENOX1Q8TC92 643 aaKnown RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 TRIM11Q96F44 468 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 BARD1Q99728 777 aaKnown RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 WDR77Q9BQA1 342 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 ZNF552Q9H707 407 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 BPIFA1Q9NP55 256 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 NFKBIL1Q9UBC1 381 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 FAM8A1Q9UBU6 413 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 PTRH2Q9Y3E5 179 aaKnown RBP13.56□□□□□ -0.24
ACTN1-219ENST00000556432 HIVEP1P15822 2718 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 MTORP42345 2549 aa13.56□□□□□ -0.24
ACTN1-219ENST00000556432 PDZD2O15018 2839 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 GSAPA4D1B5 854 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 KCNK1O00180 336 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 MASP2O00187 686 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 KCNJ13O60928 360 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 MMP2P08253 660 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 SNRPB2P08579 225 aaKnown RBP13.55□□□□□ -0.24
ACTN1-219ENST00000556432 CD48P09326 243 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 MYBL1P10243 752 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 ITGA3P26006 1051 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 PIGHQ14442 188 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms