RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 WDR37Q9Y2I8 494 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 R3HDM2Q9Y2K5 976 aaKnown RBP11.6□□□□□ -0.55
VRK1-204ENST00000555351 ZKSCAN5Q9Y2L8 839 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 TMEM184BQ9Y519 407 aaPredicted RBP11.6□□□□□ -0.55
VRK1-204ENST00000555351 HEBP2Q9Y5Z4 205 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 SLC30A1Q9Y6M5 507 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 LOC400499M0QZD8 3231 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 A0A0U1RQJ8 604 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 OR2AG2A6NM03 316 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 QSOX1O00391 747 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 POLR1CO15160 346 aaPredicted RBP11.59□□□□□ -0.55
VRK1-204ENST00000555351 GPR39O43194 453 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 SGTAO43765 313 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 LIASO43766 372 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 SUN1O94901 812 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 CCDC175P0C221 793 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 MTHFD1P11586 935 aaKnown RBP11.59□□□□□ -0.55
VRK1-204ENST00000555351 ATP1B2P14415 290 aaPredicted RBP11.59□□□□□ -0.55
VRK1-204ENST00000555351 MAP4P27816 1152 aaKnown RBP11.59□□□□□ -0.55
VRK1-204ENST00000555351 CA5AP35218 305 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 MAPK9P45984 424 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 RPA4Q13156 261 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 SEPT7Q16181 437 aaKnown RBP11.59□□□□□ -0.55
VRK1-204ENST00000555351 TAF1BQ53T94 588 aaPredicted RBP11.59□□□□□ -0.55
VRK1-204ENST00000555351 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 DRICH1Q6PGQ1 229 aaPredicted RBP11.59□□□□□ -0.55
VRK1-204ENST00000555351 C4orf22Q6V702 233 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 BPHLQ86WA6 291 aaPredicted RBP11.59□□□□□ -0.55
VRK1-204ENST00000555351 KMT5CQ86Y97 462 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 OR13C4Q8NGS5 318 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 MAIP1Q8WWC4 291 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 KLHL6Q8WZ60 621 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 UBXN4Q92575 508 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 PEX13Q92968 403 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 FCRL4Q96PJ5 515 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 ALS2CR12Q96Q35 445 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 EFHD1Q9BUP0 239 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 ZDHHC3Q9NYG2 299 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 KCTD3Q9Y597 815 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 ATRXP46100 2492 aa11.59□□□□□ -0.55
VRK1-204ENST00000555351 SDK2Q58EX2 2172 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 TCRBV7S2A1N4TA0A589 114 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 GOLGA6L3A6NEY3 463 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 MROH6A6NGR9 719 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 A8MU76 341 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 AP2A2O94973 939 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 GAS8O95995 478 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 SLC35G4P0C7Q5 338 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 SFTPCP11686 197 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 TYRP1P17643 537 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 GDF10P55107 478 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 CACNG1Q06432 222 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 ABHD18Q0P651 414 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 CDH17Q12864 832 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 OLIG2Q13516 323 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 COL9A2Q14055 689 aaPredicted RBP11.58□□□□□ -0.56
VRK1-204ENST00000555351 NFE2L1Q14494 772 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 SPARCL1Q14515 664 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 ITIH4Q14624 930 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 RPS6KA1Q15418 735 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 CCNG2Q16589 344 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 SKIDA1Q1XH10 827 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 CRTC2Q53ET0 693 aaPredicted RBP11.58□□□□□ -0.56
VRK1-204ENST00000555351 SNAP47Q5SQN1 464 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 ANKS6Q68DC2 871 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 CAPRIN2Q6IMN6 1127 aaKnown RBP11.58□□□□□ -0.56
VRK1-204ENST00000555351 FAM83HQ6ZRV2 1179 aaPredicted RBP11.58□□□□□ -0.56
VRK1-204ENST00000555351 CACNA2D3Q8IZS8 1091 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 NLGN4XQ8N0W4 816 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 IL22RA1Q8N6P7 574 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 NLGN4YQ8NFZ3 816 aaPredicted RBP11.58□□□□□ -0.56
VRK1-204ENST00000555351 RSC1A1Q92681 617 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 MED8Q96G25 268 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 CDKN2AIPNLQ96HQ2 116 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 SGSM3Q96HU1 749 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 KIR3DX1Q9H7L2 352 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 PCDHGA4Q9Y5G9 962 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 COLEC10Q9Y6Z7 277 aa11.58□□□□□ -0.56
VRK1-204ENST00000555351 AHCTF1Q8WYP5 2266 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 HEATR9A2RTY3 570 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 F8W8V4 182 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 AP3B1O00203 1094 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 MATN2O00339 956 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 NRDCO43847 1150 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 RAD1O60671 282 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 C1QL1O75973 258 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 NELFEP18615 380 aaKnown RBP11.57□□□□□ -0.56
VRK1-204ENST00000555351 ACRV1P26436 265 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 MC4RP32245 332 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 CD151P48509 253 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 GFERP55789 205 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 SEMA5AQ13591 1074 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 ZNF658BQ4V348 819 aaPredicted RBP11.57□□□□□ -0.56
VRK1-204ENST00000555351 LYPLAL1Q5VWZ2 237 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 ZNF449Q6P9G9 518 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 PACS1Q6VY07 963 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 NLRP9Q7RTR0 991 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 LRRC8AQ8IWT6 810 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 TRIM58Q8NG06 486 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 PMEPA1Q969W9 287 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms