RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 LCA5LO95447 670 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 NDST3O95803 873 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 CLDN1O95832 211 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 DDAH2O95865 285 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 DCTP40126 519 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 ITGA1P56199 1179 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 TUBB4BP68371 445 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 DMPKQ09013 629 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 XRCC4Q13426 336 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 TUBB2AQ13885 445 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 PLEKHS1Q5SXH7 462 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 CCDC70Q6NSX1 233 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 MAMDC2Q7Z304 686 aaPredicted RBP12.8□□□□□ -0.36
XRCC3-212ENST00000555231 OOSP2Q86WS3 158 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 BEND7Q8N7W2 519 aaPredicted RBP12.8□□□□□ -0.36
XRCC3-212ENST00000555231 BRSK1Q8TDC3 778 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 NAT14Q8WUY8 206 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 CPLX3Q8WVH0 158 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 TADA1Q96BN2 335 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 TCTN2Q96GX1 697 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 INSM2Q96T92 566 aaPredicted RBP12.8□□□□□ -0.36
XRCC3-212ENST00000555231 CD180Q99467 661 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 TUBB2BQ9BVA1 445 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 TLR10Q9BXR5 811 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 GLOD4Q9HC38 313 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 SOHLH2Q9NX45 425 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 FAM8A1Q9UBU6 413 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 ERRFI1Q9UJM3 462 aaPredicted RBP12.8□□□□□ -0.36
XRCC3-212ENST00000555231 ITPR2Q14571 2701 aa12.8□□□□□ -0.36
XRCC3-212ENST00000555231 LRRD1A4D1F6 860 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 OR6C74A6NCV1 312 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 SMTNL1A8MU46 457 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 MEN1O00255 615 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 BUD23O43709 281 aaKnown RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 KCNJ13O60928 360 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 ZBTB11O95625 1053 aaPredicted RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 SERPING1P05155 500 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 KLK3P07288 261 aaPredicted RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 MTHFD1P11586 935 aaKnown RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 KPNA2P52292 529 aaKnown RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 ABRQ12979 859 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 NR1I3Q14994 352 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 NR6A1Q15406 480 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 FIGNQ5HY92 759 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 TMTC4Q5T4D3 741 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 IZUMO3Q5VZ72 239 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 FAM151BQ6UXP7 276 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 ZNF517Q6ZMY9 492 aaPredicted RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 RHOT1Q8IXI2 618 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 DSELQ8IZU8 1212 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 SLC25A41Q8N5S1 370 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 ZBTB2Q8N680 514 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 CLIP3Q96DZ5 547 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 WWP1Q9H0M0 922 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 IL26Q9NPH9 171 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 TCFL5Q9UL49 500 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 PCDHGB7Q9Y5F8 929 aa12.79□□□□□ -0.36
XRCC3-212ENST00000555231 BZW2Q9Y6E2 419 aaKnown RBP12.79□□□□□ -0.36
XRCC3-212ENST00000555231 F5H423 210 aaPredicted RBP12.78□□□□□ -0.36
XRCC3-212ENST00000555231 SERPINC1P01008 464 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 CAPN1P07384 714 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 RAB40ALP0C0E4 278 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 POLR2CP19387 275 aaPredicted RBP12.78□□□□□ -0.36
XRCC3-212ENST00000555231 HMGCLP35914 325 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 SPAM1P38567 509 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 CHRNA4P43681 627 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 VAV2P52735 878 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 GSDMDP57764 484 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 PPP2R5EQ16537 467 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 PTCHD3Q3KNS1 767 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 FNBP1LQ5T0N5 605 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 GPRC6AQ5T6X5 926 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 ARMC6Q6NXE6 501 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 DET1Q7L5Y6 550 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
XRCC3-212ENST00000555231 CPT1BQ92523 772 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 PNPLA2Q96AD5 504 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 C12orf66Q96MD2 445 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 PACSIN1Q9BY11 444 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 ASF1BQ9NVP2 202 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 GPR83Q9NYM4 423 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 SLC24A2Q9UI40 661 aa12.78□□□□□ -0.36
XRCC3-212ENST00000555231 G3BP2Q9UN86 482 aaKnown RBP12.78□□□□□ -0.36
XRCC3-212ENST00000555231 MDC1Q14676 2089 aaKnown RBP12.77□□□□□ -0.36
XRCC3-212ENST00000555231 A0A0A6YYK5 440 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-212ENST00000555231 GLYATL1P3A0A0U1RQE8 302 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 SSU72P8A0A1W2PR75 194 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 SLC9B1P1A6NJY1 282 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 APOL1O14791 398 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-212ENST00000555231 LDLRP01130 860 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 CDH3P22223 829 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 RORAP35398 523 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 DYNLT1P63172 113 aa12.77□□□□□ -0.37
XRCC3-212ENST00000555231 ATP1A4Q13733 1029 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms