RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ACTR1BP42025 376 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 NSG1P42857 185 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 RPIAP49247 311 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ACTR1AP61163 376 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 SLC18A2Q05940 514 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 BNIP3Q12983 259 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 CTBP1Q13363 440 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 NAB1Q13506 487 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 C1orf61Q13536 156 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 SEMA3AQ14563 771 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 TMED2Q15363 201 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 TCEA2Q15560 299 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 KHDC1Q4VXA5 237 aaKnown RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF789Q5FWF6 425 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF648Q5T619 568 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 GRTP1Q5TC63 336 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF470Q6ECI4 717 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 PSAPL1Q6NUJ1 521 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 NEPROQ6NW34 567 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ZCCHC8Q6NZY4 707 aaKnown RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 DET1Q7L5Y6 550 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 CHST15Q7LFX5 561 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 DENND6AQ8IWF6 608 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 PIANPQ8IYJ0 282 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 EID2Q8N6I1 236 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 RASGEF1AQ8N9B8 481 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 C2CD4AQ8NCU7 369 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 GPR150Q8NGU9 434 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 OR4C6Q8NH72 309 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 MDM1Q8TC05 714 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 RHBDD1Q8TEB9 315 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 DENND1AQ8TEH3 1009 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 CDC6Q99741 560 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 CPNE1Q99829 537 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 TIMM29Q9BSF4 260 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 RTKNQ9BST9 563 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 CLPBQ9H078 707 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 TMEM168Q9H0V1 697 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 UCKL1Q9NWZ5 548 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 FTSJ1Q9UET6 329 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 TMPRSS11EQ9UL52 423 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 PNMA8BQ9ULN7 279 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 GPR34Q9UPC5 381 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 MTO1Q9Y2Z2 717 aaKnown RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ACTL7BQ9Y614 415 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 TP53BP1Q12888 1972 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 KNL1Q8NG31 2342 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 IGLV3-16A0A075B6K0 115 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 OR2AG2A6NM03 316 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 TRIM49D1C9J1S8 452 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 TYROBPO43914 113 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 KCNJ13O60928 360 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 NDUFS3O75489 264 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 HAUS5O94927 633 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 FTH1P02794 183 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 SNRPAP09012 282 aaKnown RBP10.73□□□□□ -0.69
SHMT2-218ENST00000555213 GSTM1P09488 218 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 OR56A5P0C7T3 313 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 CD59P13987 128 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 SLC2A4P14672 509 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 GP5P40197 560 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 MAGEA12P43365 314 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 LEPRP48357 1165 aaKnown RBP10.73□□□□□ -0.69
SHMT2-218ENST00000555213 CDKN1CP49918 316 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-218ENST00000555213 PPP2R2AP63151 447 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 CBX1P83916 185 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 CTBSQ01459 385 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 GSTM4Q03013 218 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 BIRC2Q13490 618 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 BMPR2Q13873 1038 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 RSPO4Q2I0M5 234 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-218ENST00000555213 DEFB133Q30KQ1 61 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 PLA2G4EQ3MJ16 856 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 BCL7AQ4VC05 210 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 SLC30A9Q6PML9 568 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 KANSL1Q7Z3B3 1105 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 STRA8Q7Z7C7 330 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 AMZ2Q86W34 360 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 SPNS2Q8IVW8 549 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 SLC25A45Q8N413 288 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 GOLGA6L1Q8N7Z2 621 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 GPBAR1Q8TDU6 330 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 ISL2Q96A47 359 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 TCF12Q99081 682 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 RBBP8Q99708 897 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 DPEP2Q9H4A9 486 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 OSGEPL1Q9H4B0 414 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 PPANQ9NQ55 473 aaKnown RBP10.73□□□□□ -0.69
SHMT2-218ENST00000555213 ADAM21Q9UKJ8 722 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 PRKAB1Q9Y478 270 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 DNMT3AQ9Y6K1 912 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF292O60281 2723 aa10.73□□□□□ -0.69
SHMT2-218ENST00000555213 ADAMTS9Q9P2N4 1935 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 IQANK1A0A1B0GTG1 560 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 UBA6A0AVT1 1052 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 B4DGG1 531 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 H3BMM5 538 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 PRMT5O14744 637 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 YY2O15391 372 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 SH3BP5O60239 455 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms