RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 DTWD1Q8N5C7 304 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 NKAPQ8N5F7 415 aaKnown RBP11.7□□□□□ -0.54
XRCC3-208ENST00000554811 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.546e-8■■■■■ 37.4
XRCC3-208ENST00000554811 KIAA1191Q96A73 305 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 TDRD1Q9BXT4 1180 aaKnown RBP11.7□□□□□ -0.54
XRCC3-208ENST00000554811 ADGRE3Q9BY15 652 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 ATG10Q9H0Y0 220 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 RERGLQ9H628 205 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 TIMMDC1Q9NPL8 285 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 OPTCQ9UBM4 332 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 ZNF490Q9ULM2 529 aaPredicted RBP11.7□□□□□ -0.54
XRCC3-208ENST00000554811 PHF24Q9UPV7 400 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 EIF3LQ9Y262 564 aaKnown RBP11.7□□□□□ -0.54
XRCC3-208ENST00000554811 LINC00854A0A1B0GVQ3 168 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 M0R3G1 203 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 PRRG1O14668 218 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 PRAMEF1O95521 474 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 ESRRBO95718 433 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 ANXA6P08133 673 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 UROSP10746 265 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 THRBP10828 461 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 FCGR1AP12314 374 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 CCNA2P20248 432 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 AGXTP21549 392 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 IL12AP29459 219 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 SLC6A4P31645 630 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 POLD2P49005 469 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 SGSHP51688 502 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 CRHR2Q13324 411 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 APOFQ13790 326 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 TRIM16LQ309B1 348 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 R3HCC1LQ7Z5L2 792 aaKnown RBP11.7□□□□□ -0.54
XRCC3-208ENST00000554811 RNF175Q8N4F7 328 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 BBS2Q9BXC9 721 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 TOR3AQ9H497 397 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 PLGRKTQ9HBL7 147 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 TMEM248Q9NWD8 314 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 ARL15Q9NXU5 204 aa11.7□□□□□ -0.54
XRCC3-208ENST00000554811 HAS3O00219 553 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 TNFRSF10BO14763 440 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 PRAMEF12O95522 483 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 MLYCDO95822 493 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 RFC2P35250 354 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 TXNL4AP83876 142 aaKnown RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 MADCAM1Q13477 382 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 GTF2H2Q13888 395 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 TRIP4Q15650 581 aaPredicted RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 TBC1D25Q3MII6 688 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 ZBED5Q49AG3 693 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 GTF2H2CQ6P1K8 395 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 TBC1D21Q8IYX1 336 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 TRIB2Q92519 343 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 NCSTNQ92542 709 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 GLT1D1Q96MS3 346 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 ANKRD60Q9BZ19 345 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 DAPK2Q9UIK4 370 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 PCDHB7Q9Y5E2 793 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 ST14Q9Y5Y6 855 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 AQP12BA6NM10 295 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 ULK1O75385 1050 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 MZF1P28698 734 aaPredicted RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 TPP2P29144 1249 aaPredicted RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 PBLDP30039 288 aaPredicted RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 HALP42357 657 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 CCT8P50990 548 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 CYP4F2P78329 520 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 CYP4F3Q08477 520 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 SF1Q15637 639 aaKnown RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 PARP15Q460N3 678 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 NADSYN1Q6IA69 706 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 ZNF621Q6ZSS3 439 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 LRRC8DQ7L1W4 858 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 AQP12AQ8IXF9 295 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 RNF168Q8IYW5 571 aaPredicted RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 SFRP1Q8N474 314 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 ATG16L2Q8NAA4 619 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 PSD4Q8NDX1 1056 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 CNIH3Q8TBE1 160 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 AUTS2Q8WXX7 1259 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 TFB2MQ9H5Q4 396 aaKnown RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 SDR39U1Q9NRG7 319 aaPredicted RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 MRGBPQ9NV56 204 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 CHCHD3Q9NX63 227 aaKnown RBP11.69□□□□□ -0.54
XRCC3-208ENST00000554811 NEU3Q9UQ49 428 aa11.69□□□□□ -0.54
XRCC3-208ENST00000554811 GLUD1P00367 558 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 SHMT2P34897 504 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 TTPAP49638 278 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 ACADVLP49748 655 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 RGS4P49798 205 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 ERVK-8P63133 956 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 PRKCZQ05513 592 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 SERINC5Q86VE9 423 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 FRS2Q8WU20 508 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 SELENOMQ8WWX9 145 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 SLC47A1Q96FL8 570 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 FEM1CQ96JP0 617 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 MYRFLQ96LU7 910 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 CGREF1Q99674 301 aa11.68□□□□□ -0.54
XRCC3-208ENST00000554811 ELOVL6Q9H5J4 265 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms