RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 TFDP2Q14188 446 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 TFDP3Q5H9I0 405 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 ZDHHC20Q5W0Z9 365 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 TCTN3Q6NUS6 607 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 BEND7Q8N7W2 519 aaPredicted RBP11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 BLOC1S5Q8TDH9 187 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 CT55Q8WUE5 264 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 STAMBPL1Q96FJ0 436 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 TTC25Q96NG3 672 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 INSM2Q96T92 566 aaPredicted RBP11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 C10orf88Q9H8K7 445 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 HACD3Q9P035 362 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 LNPEPQ9UIQ6 1025 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 KCND3Q9UK17 655 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 PLAAQ9Y263 795 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 PCDHB3Q9Y5E6 796 aa11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 CFAP20Q9Y6A4 193 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-207ENST00000554677 CNTRLQ7Z7A1 2325 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 GLYATL1P3A0A0U1RQE8 302 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 MTSS1O43312 755 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 CBFA2T2O43439 604 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 PSTPIP1O43586 416 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 SPOPO43791 374 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 PDGFAP04085 211 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 CCNYL3P0C7X3 344 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 EBLN1P0CF75 366 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 MTHFD1P11586 935 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 HLA-DPA1P20036 260 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 HALP42357 657 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 MPP3Q13368 585 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 FAM199XQ6PEV8 388 aaPredicted RBP11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 RANBP10Q6VN20 620 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 GLT6D1Q7Z4J2 308 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 KATNAL2Q8IYT4 538 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 D2HGDHQ8N465 521 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 SIDT2Q8NBJ9 832 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 IPMKQ8NFU5 416 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 ZNF398Q8TD17 642 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 UBXN4Q92575 508 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 P3H4Q92791 437 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 MIB2Q96AX9 1013 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 HAUS1Q96CS2 278 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 PPM1MQ96MI6 270 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 FCRL4Q96PJ5 515 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 QKIQ96PU8 341 aaKnown RBP eCLIP11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 VAT1Q99536 393 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 PDE7BQ9NP56 450 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 SMOXQ9NWM0 555 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 KLHL8Q9P2G9 620 aaPredicted RBP11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 ANKMY1Q9P2S6 941 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 TLK1Q9UKI8 766 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 RARRES3Q9UL19 164 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 TFR2Q9UP52 801 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 POLHQ9Y253 713 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 ARL5AQ9Y689 179 aa11.94□□□□□ -0.5
MTHFD1-207ENST00000554677 PIPSLA2A3N6 862 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 CDC14CA4D256 554 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 MGAT4DA6NG13 374 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 AGAP14A8MT82 685 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 HACD1B0YJ81 288 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 ZRANB2O95218 330 aaKnown RBP eCLIP11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 MT-ND3P03897 115 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 NTRK1P04629 796 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 PYGBP11216 843 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 RBL1P28749 1068 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 ADRA1AP35348 466 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 CD97P48960 835 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 PMS2P54278 862 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 XIAPP98170 497 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 KLRB1Q12918 225 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 TUBB3Q13509 450 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 OLIG2Q13516 323 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 ITGA9Q13797 1035 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 SEPT6Q14141 434 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 PPP2R5EQ16537 467 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 ODF2Q5BJF6 829 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 FNBP1LQ5T0N5 605 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 DUS1LQ6P1R4 473 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 ZNF517Q6ZMY9 492 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 BPHLQ86WA6 291 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 APLFQ8IW19 511 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 RCOR2Q8IZ40 523 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 LILRA3Q8N6C8 439 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 SLC38A9Q8NBW4 561 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 ZFPM2Q8WW38 1151 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 KRT35Q92764 455 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 TRIM55Q9BYV6 548 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 TWSG1Q9GZX9 223 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 WWP1Q9H0M0 922 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 FGF21Q9NSA1 209 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 TRHDEQ9UKU6 1024 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 CACNA1DQ01668 2161 aa11.93□□□□□ -0.5
MTHFD1-207ENST00000554677 OR5K3A6NET4 321 aa11.92□□□□□ -0.5
MTHFD1-207ENST00000554677 TLCD2A6NGC4 264 aa11.92□□□□□ -0.5
MTHFD1-207ENST00000554677 C21orf140B9A014 251 aa11.92□□□□□ -0.5
MTHFD1-207ENST00000554677 MKRN2OSH3BPM6 223 aa11.92□□□□□ -0.5
MTHFD1-207ENST00000554677 STX7O15400 261 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-207ENST00000554677 DNAJB5O75953 348 aa11.92□□□□□ -0.5
MTHFD1-207ENST00000554677 LCA5LO95447 670 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms