RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ANKS6Q68DC2 871 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 KLHL35Q6PF15 583 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 PCSK4Q6UW60 755 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 FAM83HQ6ZRV2 1179 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-207ENST00000553290 ZNF662Q6ZS27 426 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 VASH2Q86V25 355 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 SLC13A5Q86YT5 568 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-207ENST00000553290 STYXQ8WUJ0 223 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 ATG4AQ8WYN0 398 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 NKD1Q969G9 470 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 ZDHHC12Q96GR4 267 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 TGM7Q96PF1 710 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 ALS2CR12Q96Q35 445 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 COPS8Q99627 209 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 RAB33BQ9H082 229 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 NLE1Q9NVX2 485 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-207ENST00000553290 PSMD13Q9UNM6 376 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 TRBV5-4A0A0C4DH59 114 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 C17orf113A0A1B0GUU1 675 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 POLR1CO15160 346 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-207ENST00000553290 GAS8O95995 478 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 CCDC175P0C221 793 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 MTHFD1P11586 935 aaKnown RBP12.68□□□□□ -0.38
ACTN1-207ENST00000553290 ATP1B2P14415 290 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-207ENST00000553290 TPH1P17752 444 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 FDFT1P37268 417 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 PRLHRP49683 370 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 SRSF6Q13247 344 aaKnown RBP12.68□□□□□ -0.38
ACTN1-207ENST00000553290 SEPT6Q14141 434 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 ZRANB3Q5FWF4 1079 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 PRSS42Q7Z5A4 293 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 CACNA2D3Q8IZS8 1091 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 IL22RA1Q8N6P7 574 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 HM13Q8TCT9 377 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 ZFPM2Q8WW38 1151 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 JPH3Q8WXH2 748 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-207ENST00000553290 RSC1A1Q92681 617 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 CDKN2AIPNLQ96HQ2 116 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 DNAJC1Q96KC8 554 aaKnown RBP12.68□□□□□ -0.38
ACTN1-207ENST00000553290 CCM2Q9BSQ5 444 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 ZNF768Q9H5H4 540 aaKnown RBP12.68□□□□□ -0.38
ACTN1-207ENST00000553290 ZDHHC3Q9NYG2 299 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 ZNF148Q9UQR1 794 aa12.68□□□□□ -0.38
ACTN1-207ENST00000553290 IGLV3-16A0A075B6K0 115 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 SGTAO43765 313 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 RAD1O60671 282 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 RASSF9O75901 435 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 IFNB1P01574 187 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 PRB1P04280 392 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 ITGB2P05107 769 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 SLC35G4P0C7Q5 338 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 ACRV1P26436 265 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 MAP4P27816 1152 aaKnown RBP12.67□□□□□ -0.38
ACTN1-207ENST00000553290 CACNG1Q06432 222 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 CDH17Q12864 832 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 LAMB3Q13751 1172 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 POU6F1Q14863 301 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 PLCL1Q15111 1095 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 CACHD1Q5VU97 1274 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 IRGCQ6NXR0 463 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 XKR5Q6UX68 686 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 TAS2R42Q7RTR8 314 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 TAB3Q8N5C8 712 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-207ENST00000553290 DNAAF3Q8N9W5 541 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 GPR150Q8NGU9 434 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 C1orf54Q8WWF1 131 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 C12orf66Q96MD2 445 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 INSM2Q96T92 566 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-207ENST00000553290 CTRCQ99895 268 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 SPRY4Q9C004 299 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 WWP1Q9H0M0 922 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 TRIT1Q9H3H1 467 aaKnown RBP12.67□□□□□ -0.38
ACTN1-207ENST00000553290 FAM96AQ9H5X1 160 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 VPS37BQ9H9H4 285 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 IMP3Q9NV31 184 aaKnown RBP12.67□□□□□ -0.38
ACTN1-207ENST00000553290 SIDT1Q9NXL6 827 aaKnown RBP12.67□□□□□ -0.38
ACTN1-207ENST00000553290 FAM8A1Q9UBU6 413 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 PILRAQ9UKJ1 303 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 TMEM184BQ9Y519 407 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-207ENST00000553290 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 HEBP2Q9Y5Z4 205 aa12.67□□□□□ -0.38
ACTN1-207ENST00000553290 MROH6A6NGR9 719 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 E7EVH7 732 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 CCL22O00626 93 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 NRDCO43847 1150 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 C1QL1O75973 258 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 SUN1O94901 812 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 GSTM1P09488 218 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 PSMA3P25788 255 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 NDUFS1P28331 727 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 LEPRP48357 1165 aaKnown RBP12.66□□□□□ -0.38
ACTN1-207ENST00000553290 LMAN1P49257 510 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 SEPHS1P49903 392 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 CDKN1CP49918 316 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-207ENST00000553290 GSTM4Q03013 218 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 FOXM1Q08050 763 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 GSE1Q14687 1217 aa12.66□□□□□ -0.38
ACTN1-207ENST00000553290 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
ACTN1-207ENST00000553290 CYB5D1Q6P9G0 228 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms