RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MEI1Q5TIA1 1274 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 CACHD1Q5VU97 1274 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 ALS2CLQ60I27 953 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 AADACL2Q6P093 401 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 CYB5D1Q6P9G0 228 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 CRTC3Q6UUV7 619 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 ASB18Q6ZVZ8 466 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 ZC3H18Q86VM9 953 aaKnown RBP11.62□□□□□ -0.55
CKAP4-202ENST00000552828 ATCAYQ86WG3 371 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 PPP1R3BQ86XI6 285 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 RASGRP3Q8IV61 690 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 TEX19Q8NA77 164 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 DTX3LQ8TDB6 740 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 HAUS1Q96CS2 278 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 SLC41A2Q96JW4 573 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 VPS35Q96QK1 796 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 SRPK1Q96SB4 655 aaKnown RBP11.62□□□□□ -0.55
CKAP4-202ENST00000552828 SLC25A51Q9H1U9 297 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 LHX9Q9NQ69 397 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 TLK1Q9UKI8 766 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 SHOC2Q9UQ13 582 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 ZNF711Q9Y462 761 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 PIPSLA2A3N6 862 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 OR52A4PA6NMU1 304 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 KATNA1O75449 491 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 RASSF9O75901 435 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 CDK14O94921 469 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 PIRTP0C851 137 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 NR1D1P20393 614 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 RPL10P27635 214 aaKnown RBP11.61□□□□□ -0.55
CKAP4-202ENST00000552828 MLLT10P55197 1068 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 OTUD4Q01804 1114 aaKnown RBP11.61□□□□□ -0.55
CKAP4-202ENST00000552828 SEMA5AQ13591 1074 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 DNASE1L3Q13609 305 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 PRKD1Q15139 912 aaPredicted RBP11.61□□□□□ -0.55
CKAP4-202ENST00000552828 SEPT7Q16181 437 aaKnown RBP11.61□□□□□ -0.55
CKAP4-202ENST00000552828 TEX44Q53QW1 395 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 SEL1L2Q5TEA6 688 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 B4GALNT4Q76KP1 1039 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 TMEM135Q86UB9 458 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 BPHLQ86WA6 291 aaPredicted RBP11.61□□□□□ -0.55
CKAP4-202ENST00000552828 LURAP1LQ8IV03 231 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 REXO1L1PQ8IX06 675 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 ACTL9Q8TC94 416 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 SEC14L1Q92503 715 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 UBXN4Q92575 508 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 FERMT1Q9BQL6 677 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 GPR87Q9BY21 358 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 TWSG1Q9GZX9 223 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 LNPEPQ9UIQ6 1025 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 DNAJC16Q9Y2G8 782 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 WDR37Q9Y2I8 494 aa11.61□□□□□ -0.55
CKAP4-202ENST00000552828 CDC14CA4D256 554 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 H7C0C1 242 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 MTX2O75431 263 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 TIAF1O95411 115 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 NDST3O95803 873 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 PDGFAP04085 211 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 VCLP18206 1134 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 HMGCLP35914 325 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 ATP5OP48047 213 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 DRG2P55039 364 aaKnown RBP11.6□□□□□ -0.55
CKAP4-202ENST00000552828 EIF3EP60228 445 aaKnown RBP11.6□□□□□ -0.55
CKAP4-202ENST00000552828 DMPKQ09013 629 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 TMEM115Q12893 351 aaPredicted RBP11.6□□□□□ -0.55
CKAP4-202ENST00000552828 LAMB3Q13751 1172 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 NOMO1Q15155 1222 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 PLA2G4EQ3MJ16 856 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 ATP13A5Q4VNC0 1218 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 PWWP2BQ6NUJ5 590 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 FAM92BQ6ZTR7 304 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 BRSK1Q8TDC3 778 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 CT55Q8WUE5 264 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 CXorf40BQ96DE9 158 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 ELMO2Q96JJ3 720 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 AGAP3Q96P47 875 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 QKIQ96PU8 341 aaKnown RBP eCLIP11.6□□□□□ -0.55
CKAP4-202ENST00000552828 VAT1Q99536 393 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 GPR63Q9BZJ6 419 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 PDE7BQ9NP56 450 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 MLXIPLQ9NP71 852 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 TRMT1Q9NXH9 659 aaKnown RBP11.6□□□□□ -0.55
CKAP4-202ENST00000552828 SPO11Q9Y5K1 396 aa11.6□□□□□ -0.55
CKAP4-202ENST00000552828 RP1L1Q8IWN7 2480 aaPredicted RBP11.6□□□□□ -0.55
CKAP4-202ENST00000552828 SPTBN1Q01082 2364 aaKnown RBP11.6□□□□□ -0.55
CKAP4-202ENST00000552828 IGHV5-51A0A0C4DH38 117 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 BLACEA4D250 179 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 AURKAO14965 403 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 KIF5CO60282 957 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 ZNF189O75820 626 aaPredicted RBP11.59□□□□□ -0.55
CKAP4-202ENST00000552828 RBP3P10745 1247 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 FOLR1P15328 257 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 MSNP26038 577 aaKnown RBP11.59□□□□□ -0.55
CKAP4-202ENST00000552828 PTPN3P26045 913 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 WASHC5Q12768 1159 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 TUBB3Q13509 450 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 UGT8Q16880 541 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 FAM182AQ5T1J6 154 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 PAPD7Q5XG87 772 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms