RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 DYNLT1P63172 113 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 UBE2IP63279 158 aaKnown RBP8.54□□□□□ -1.04
TMEM116-217ENST00000552801 IFI35P80217 286 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-217ENST00000552801 ACY1Q03154 408 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 PPIDQ08752 370 aaKnown RBP8.54□□□□□ -1.04
TMEM116-217ENST00000552801 XRCC4Q13426 336 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 TUBB3Q13509 450 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 DNASE1L3Q13609 305 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 ATP13A4Q4VNC1 1196 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 TMTC4Q5T4D3 741 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 ATP1A1-AS1Q5TC04 95 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 ADGRG6Q86SQ4 1221 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 AMZ2Q86W34 360 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 FAM71BQ8TC56 605 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 RNF157Q96PX1 679 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 FERMT1Q9BQL6 677 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 CEP41Q9BYV8 373 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 SLC7A5P2Q9GIP4 190 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 BRD8Q9H0E9 1235 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 SLC25A51Q9H1U9 297 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 FANCEQ9HB96 536 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 ACSS2Q9NR19 701 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 ABHD10Q9NUJ1 306 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEM116-217ENST00000552801 DTLQ9NZJ0 730 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 RAB21Q9UL25 225 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 CAPN11Q9UMQ6 739 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 PKP3Q9Y446 797 aa8.54□□□□□ -1.04
TMEM116-217ENST00000552801 CCDC151A5D8V7 595 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 OR52A4PA6NMU1 304 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 C21orf140B9A014 251 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 KIF5CO60282 957 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 SPAG6O75602 509 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 CREG1O75629 220 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 AGFG2O95081 481 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 NDST3O95803 873 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 KLK3P07288 261 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 MSH3P20585 1137 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 KDELR1P24390 212 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 PBLDP30039 288 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 ARHGAP25P42331 645 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 LEPRP48357 1165 aaKnown RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 PGDP52209 483 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 TMEM115Q12893 351 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 PRKAA1Q13131 559 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 ITGA9Q13797 1035 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 GPR18Q14330 331 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 BRD3Q15059 726 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 LDLRAP1Q5SW96 308 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 HGSNATQ68CP4 663 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 TCTN3Q6NUS6 607 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 PRSS42Q7Z5A4 293 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 TMEM126BQ8IUX1 230 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 BEND7Q8N7W2 519 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 GPR26Q8NDV2 337 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 IMP4Q96G21 291 aaKnown RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 DNAJC7Q99615 494 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 TRABDQ9H4I3 376 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 BPIFA1Q9NP55 256 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 SOHLH2Q9NX45 425 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 SIDT1Q9NXL6 827 aaKnown RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 KLHL8Q9P2G9 620 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 ZNF624Q9P2J8 865 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 CDC23Q9UJX2 597 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 PLAAQ9Y263 795 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 PCYT1BQ9Y5K3 369 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-217ENST00000552801 KCNMB2Q9Y691 235 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 SLC30A1Q9Y6M5 507 aa8.53□□□□□ -1.04
TMEM116-217ENST00000552801 CHUKO15111 745 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 MTSS1O43312 755 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SPOPO43791 374 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 TUBBP07437 444 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 FGF5P12034 268 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 ZNF28P17035 718 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 BPIP17213 487 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 NELFEP18615 380 aaKnown RBP8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SPAM1P38567 509 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 ARSEP51690 589 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 PMS2P54278 862 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 MLLT10P55197 1068 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 TAS2R40P59535 323 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SRSF1Q07955 248 aaKnown RBP eCLIP8.52□□□□□ -1.05
TMEM116-217ENST00000552801 ZBTB17Q13105 803 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 TFDP2Q14188 446 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 WHAMMP3Q1A5X7 153 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 LONRF2Q1L5Z9 754 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 C4orf17Q53FE4 359 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 FHL5Q5TD97 284 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 CCDC181Q5TID7 509 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 AGAP9Q5VTM2 703 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 ZNF449Q6P9G9 518 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 ABRAXAS1Q6UWZ7 409 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 WASH2PQ6VEQ5 465 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 GLT6D1Q7Z4J2 308 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 TMC3Q7Z5M5 1100 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 HOOK3Q86VS8 718 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 OOSP2Q86WS3 158 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SLC25A41Q8N5S1 370 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms