RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 MAGEB16A2A368 324 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 LILRA5A6NI73 299 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 PFDN6O15212 129 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 CD3EAPO15446 510 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 TTI1O43156 1089 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 SGTAO43765 313 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 VAPBO95292 243 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 POLBP06746 335 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 BRAFP15056 766 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 SLC19A1P41440 591 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 EPHA4P54764 986 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 GABREP78334 506 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 DNAJC21Q5F1R6 531 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 C3orf38Q5JPI3 329 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 PHF19Q5T6S3 580 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 METRNLQ641Q3 311 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 KIAA0930Q6ICG6 404 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 MRNIPQ6NTE8 343 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 TMEM26Q6ZUK4 368 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 RBM12BQ8IXT5 1001 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 TRIM51Q9BSJ1 452 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 TSSK1BQ9BXA7 367 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 WWP1Q9H0M0 922 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 EPB41L1Q9H4G0 881 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 COG4Q9H9E3 785 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 IMP3Q9NV31 184 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 AKAP7Q9P0M2 348 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 ZNF624Q9P2J8 865 aaPredicted RBP18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 WDR37Q9Y2I8 494 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 CCDC187A0A096LP49 1063 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 FAM237BA0A1B0GVD1 139 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 IFRD1O00458 451 aaPredicted RBP18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 NDC80O14777 642 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 NDUFS3O75489 264 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 CCKBRP32239 447 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 PDX1P52945 283 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 CKAP4Q07065 602 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 CYP4F3Q08477 520 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 EIF3IQ13347 325 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 CLCA4Q14CN2 919 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 SYTL3Q4VX76 610 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 NKAIN2Q5VXU1 208 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 FOXR1Q6PIV2 292 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 B3GNT8Q7Z7M8 397 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 SDCCAG8Q86SQ7 713 aaPredicted RBP18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 SPATA4Q8NEY3 305 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 WDR36Q8NI36 951 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 MDM1Q8TC05 714 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 C12orf66Q96MD2 445 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 NUDT22Q9BRQ3 303 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 POLR1BQ9H9Y6 1135 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 UCK1Q9HA47 277 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 RPS6KL1Q9Y6S9 549 aa18.1■□□□□ 0.49
PRPF40B-216ENST00000552301 IGF2RP11717 2491 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 EFCAB8A8MWE9 144 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 SMAPO00193 183 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 OR1I1O60431 355 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 MPOP05164 745 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 MTHFD1P11586 935 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 AMD1P17707 334 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 CD1CP29017 333 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 KRT33BQ14525 404 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 RTP5Q14D33 572 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 MORF4L2Q15014 288 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 RPE65Q16518 533 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 RNF187Q5TA31 235 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 MAATS1Q7Z4T9 603 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 LDB1Q86U70 411 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 LSMEM2Q8N112 164 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 ELMO1Q92556 727 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 STAMBPL1Q96FJ0 436 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 LIN37Q96GY3 246 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 SNF8Q96H20 258 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 TBC1D10AQ9BXI6 508 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 TRIM31Q9BZY9 425 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 MARCH4Q9P2E8 410 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 SATB2Q9UPW6 733 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 CFAP20Q9Y6A4 193 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 PRSS21Q9Y6M0 314 aa18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 COL27A1Q8IZC6 1860 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-216ENST00000552301 MAP1BP46821 2468 aaKnown RBP18.08■□□□□ 0.49
PRPF40B-216ENST00000552301 UBA6A0AVT1 1052 aaPredicted RBP18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 PRMT5O14744 637 aaPredicted RBP18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 LIN7AO14910 233 aaPredicted RBP18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 RBMS1P29558 406 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 CSF2RBP32927 897 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 MAGEA3P43357 314 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 LSSP48449 732 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 C2orf54Q08AI8 447 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 RPA4Q13156 261 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 THOC5Q13769 683 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 BOP1Q14137 746 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 SEMA3AQ14563 771 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 PLCL1Q15111 1095 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 ST3GAL2Q16842 350 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 ANKRD20A4Q4UJ75 823 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 PTRHD1Q6GMV3 140 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 SLITRK4Q8IW52 837 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 PDIK1LQ8N165 341 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 LILRA3Q8N6C8 439 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms