RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 IL15P40933 162 aaPredicted RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 CRKLP46109 303 aaKnown RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 CLCNKBP51801 687 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 CASP9P55211 416 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 SPOCK1Q08629 439 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 NAE1Q13564 534 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ZNF789Q5FWF6 425 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 TEX38Q6PEX7 206 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 FBXO46Q6PJ61 603 aaPredicted RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 KCTD9Q7L273 389 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 HAPLN4Q86UW8 402 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ZNF595Q8IYB9 648 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 TBC1D21Q8IYX1 336 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 CLYBLQ8N0X4 340 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ZBTB2Q8N680 514 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 LPCAT1Q8NF37 534 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 GJC3Q8NFK1 279 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 IPMKQ8NFU5 416 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 SPATA18Q8TC71 538 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 SLC13A3Q8WWT9 602 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ZNF606Q8WXB4 792 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ROBO4Q8WZ75 1007 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 BCL2L2Q92843 193 aaPredicted RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 RUFY1Q96T51 708 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 FZD8Q9H461 694 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 PRMT7Q9NVM4 692 aaPredicted RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 VPS18Q9P253 973 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ITGA11Q9UKX5 1188 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 SNX7Q9UNH6 387 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 LAMP3Q9UQV4 416 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 RRP15Q9Y3B9 282 aaKnown RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 A3GALT2U3KPV4 340 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 SYNJ2BP-COX16A0A087WUM0 186 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SMIM30A4D0T7 59 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 C5orf52A6NGY3 159 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 FAM86B1E9PN63 330 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 H0YIN7 160 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 RHODO00212 210 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 IKBKBO14920 756 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 EIF3DO15371 548 aaKnown RBP eCLIP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 RNMTO43148 476 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SMAD6O43541 496 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SMPD2O60906 423 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 NOL3O60936 208 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 CREG1O75629 220 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 LETM1O95202 739 aaPredicted RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 TRIM16O95361 564 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 ALPPP05187 535 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 FAM86B2P0C5J1 330 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 ALPPL2P10696 532 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 DNASE1P24855 282 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 CD27P26842 260 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 CCKARP32238 428 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 GPR12P47775 334 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 ALDH7A1P49419 539 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 ATXN3P54252 364 aaPredicted RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 NME5P56597 212 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SLC26A5P58743 744 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SORDQ00796 357 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SREBF2Q12772 1141 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 PKP1Q13835 747 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 GALNT3Q14435 633 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SOWAHAQ2M3V2 549 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 C6orf10Q5SRN2 563 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 C12orf60Q5U649 245 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 RUSC1-AS1Q66K80 236 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 HIST2H2BCQ6DN03 193 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 HIST2H2BDQ6DRA6 164 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 FAM198BQ6UWH4 519 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 INTS8Q75QN2 995 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 DPPA4Q7L190 304 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 MEPCEQ7L2J0 689 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 LINGO2Q7L985 606 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 PPP1R42Q7Z4L9 355 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 RPAINQ86UA6 219 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 DZIP1Q86YF9 867 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 GPSM1Q86YR5 675 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 TMC8Q8IU68 726 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 MCPH1Q8NEM0 835 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 BEST2Q8NFU1 509 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 TAS1R2Q8TE23 839 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 ATOH1Q92858 354 aaPredicted RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SPSB1Q96BD6 273 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 RNF183Q96D59 192 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 FAM111AQ96PZ2 611 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 ACOX2Q99424 681 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 WDR83Q9BRX9 315 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 ACTR5Q9H9F9 607 aaPredicted RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 EPB41L5Q9HCM4 733 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 DDX4Q9NQI0 724 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 COMMD8Q9NX08 183 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 TRPC4Q9UBN4 977 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 IPO11Q9UI26 975 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 SLC24A2Q9UI40 661 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 ZNF580Q9UK33 172 aa4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 RPH3AQ9Y2J0 694 aaPredicted RBP4.54□□□□□ -1.68
RAB3IP-214ENST00000550847 A0A096LPK6 155 aa4.53□□□□□ -1.68
RAB3IP-214ENST00000550847 A0A0B4J293 547 aa4.53□□□□□ -1.68
RAB3IP-214ENST00000550847 SYCE3A1L190 88 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms