RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 GPR63Q9BZJ6 419 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 RAB33BQ9H082 229 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 TRABDQ9H4I3 376 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 SLC40A1Q9NP59 571 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 ARFGAP3Q9NP61 516 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 ZNF71Q9NQZ8 489 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 IFNKQ9P0W0 207 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 ZNF624Q9P2J8 865 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 EPHA6Q9UF33 1036 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 SLC23A2Q9UGH3 650 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 SHOC2Q9UQ13 582 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.49□□□□□ -1.21
NEK3-201ENST00000550331 SLC30A1Q9Y6M5 507 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 RPS6KL1Q9Y6S9 549 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 A0A0A6YYK5 440 aaPredicted RBP7.48□□□□□ -1.21
NEK3-201ENST00000550331 SYCE3A1L190 88 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 GOLGA6L19H0YKK7 550 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 PAX4O43316 350 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 MTX2O75431 263 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 RASSF9O75901 435 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 NDUFA10O95299 355 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 TPM3P06753 285 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 FGF5P12034 268 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 BRAFP15056 766 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 IDSP22304 550 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 F8A1P23610 371 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 HMGCLP35914 325 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 DLSTP36957 453 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 HALP42357 657 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 LEPRP48357 1165 aaKnown RBP7.48□□□□□ -1.21
NEK3-201ENST00000550331 FOXM1Q08050 763 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 DMPKQ09013 629 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 GTF2H3Q13889 308 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 GPR18Q14330 331 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 MESDQ14696 234 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 PRKD1Q15139 912 aaPredicted RBP7.48□□□□□ -1.21
NEK3-201ENST00000550331 SEPT7Q16181 437 aaKnown RBP7.48□□□□□ -1.21
NEK3-201ENST00000550331 DEFB109BQ30KR1 87 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.48□□□□□ -1.21
NEK3-201ENST00000550331 LACTB2Q53H82 288 aaPredicted RBP7.48□□□□□ -1.21
NEK3-201ENST00000550331 TEX44Q53QW1 395 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 ATCAYQ86WG3 371 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 RHOT2Q8IXI1 618 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 OR8K1Q8NGG5 319 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 BRSK1Q8TDC3 778 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 RSC1A1Q92681 617 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 CXorf40BQ96DE9 158 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 STAMBPL1Q96FJ0 436 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 ZDHHC12Q96GR4 267 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 ABHD17AQ96GS6 310 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 TEKT5Q96M29 485 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 FCRL4Q96PJ5 515 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 OR6C1Q96RD1 312 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 DNAJC7Q99615 494 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 ANP32EQ9BTT0 268 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 CEP41Q9BYV8 373 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 ZCCHC2Q9C0B9 1178 aaKnown RBP7.48□□□□□ -1.21
NEK3-201ENST00000550331 DEF6Q9H4E7 631 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 GLOD4Q9HC38 313 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 SEMA5BQ9P283 1151 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 KCND3Q9UK17 655 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 CROTQ9UKG9 612 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 DNAJC16Q9Y2G8 782 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 PCDHGA6Q9Y5G7 932 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 KCNMB2Q9Y691 235 aa7.48□□□□□ -1.21
NEK3-201ENST00000550331 OR52A4PA6NMU1 304 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 MKRN2OSH3BPM6 223 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 AURKAO14965 403 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 MTSS1O43312 755 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 AKR1B10O60218 316 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 SPAG6O75602 509 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 KIAA0754O94854 1291 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 AGFG2O95081 481 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 RECKO95980 971 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 MT-CYBP00156 380 aaPredicted RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 EPOP01588 193 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 MT-ND3P03897 115 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 KRT1P04264 644 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 NELFEP18615 380 aaKnown RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 PTPN3P26045 913 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 RPL10P27635 214 aaKnown RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 SLC1A1P43005 524 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 TNNT3P45378 269 aaPredicted RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 NR2C2P49116 596 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 SEPHS1P49903 392 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 TMEM115Q12893 351 aaPredicted RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 KLRB1Q12918 225 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 TRIM14Q14142 442 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 TFDP2Q14188 446 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 ATP13A5Q4VNC0 1218 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 KHDC1Q4VXA5 237 aaKnown RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 ODF2Q5BJF6 829 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 ATP1A1-AS1Q5TC04 95 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 CACHD1Q5VU97 1274 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 C16orf46Q6P387 395 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 KLHL35Q6PF15 583 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 SLCO4C1Q6ZQN7 724 aa7.47□□□□□ -1.21
NEK3-201ENST00000550331 BZW1Q7L1Q6 419 aaKnown RBP7.47□□□□□ -1.21
NEK3-201ENST00000550331 C11orf96Q7Z7L8 435 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms