RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 MYL12BO14950 172 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SUV39H1O43463 412 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 UGT2B4P06133 528 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CD36P16671 472 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 GRK3P35626 688 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 IL12RB1P42701 662 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 KIR3DL1P43629 444 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 AGTR2P50052 363 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SLC16A1P53985 500 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 HUNKP57058 714 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SPIBQ01892 262 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SOX4Q06945 474 aaPredicted RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 PARP15Q460N3 678 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 UNC50Q53HI1 259 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 COLEC12Q5KU26 742 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SVOPLQ8N434 492 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 ZNF597Q96LX8 424 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 ANKRD60Q9BZ19 345 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CIPCQ9C0C6 399 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 FAIMQ9NVQ4 179 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 RAPGEFL1Q9UHV5 662 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 DNAJC15Q9Y5T4 150 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 H0YJX3 145 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 XPNPEP2O43895 674 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 KERAO60938 352 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 OR56A5P0C7T3 313 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 G6PDP11413 515 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 DNAJB1P25685 340 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 ALDH7A1P49419 539 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 ZNF157P51786 506 aaPredicted RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CDC42P60953 191 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 GPR153Q6NV75 609 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 GPRIN1Q7Z2K8 1008 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 METTL25Q8N6Q8 603 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SMG8Q8ND04 991 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 GRIN3AQ8TCU5 1115 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CENPIQ92674 756 aaPredicted RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SPON1Q9HCB6 807 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 INTS7Q9NVH2 962 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 TRPC4Q9UBN4 977 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SMCHD1A6NHR9 2005 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 EFCAB9A8MZ26 197 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 PIRO00625 290 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 TMCC2O75069 709 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 TNFRSF21O75509 655 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 DIRAS1O95057 198 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 RASAL1O95294 804 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CELF2O95319 508 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 OGNP20774 298 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 ITPKAP23677 461 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 RFC2P35250 354 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 YBEYP58557 167 aaPredicted RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 KCNAB2Q13303 367 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 DDX53Q86TM3 631 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 OR5K1Q8NHB7 308 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 WBP11Q9Y2W2 641 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 STK16O75716 305 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 C1RP00736 705 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 BMP2P12643 396 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CAPN3P20807 821 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 KCNA5P22460 613 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 HTR7P34969 479 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CTSKP43235 329 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 COPZ1P61923 177 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 SH3BP2P78314 561 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 TXNL4AP83876 142 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 GHRHRQ02643 423 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CNTN1Q12860 1018 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 NIPAL1Q6NVV3 410 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 PHF10Q8WUB8 498 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 ANKRD49Q8WVL7 239 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 TSPAN18Q96SJ8 248 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 MARCH4Q9P2E8 410 aaPredicted RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 GMPR2Q9P2T1 348 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 CRNNQ9UBG3 495 aaPredicted RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 ABT1Q9ULW3 272 aaKnown RBP10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 WDR37Q9Y2I8 494 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 HS3ST4Q9Y661 456 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 MAST2Q6P0Q8 1798 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 COL4A1P02462 1669 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 LOC100130705A0A1B0GUX0 176 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 FAM25AB3EWG3 89 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 FAM25CB3EWG5 89 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 FAM25GB3EWG6 89 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 PSMD11O00231 422 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 B4GAT1O43505 415 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 XYLBO75191 536 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 IST1P53990 364 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 VBP1P61758 197 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 FOXM1Q08050 763 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 NFATC3Q12968 1075 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 DOK6Q6PKX4 331 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 SLC22A16Q86VW1 577 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 RBFAQ8N0V3 343 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 SLC15A4Q8N697 577 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 TMEM159Q96B96 161 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 COQ7Q99807 217 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 POLE4Q9NR33 117 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 DNMT3LQ9UJW3 386 aa10.08□□□□□ -0.8
SMARCC2-209ENST00000550164 SCN7AQ01118 1682 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms