RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 LRRC1Q9BTT6 524 aa18.99■□□□□ 0.63
DDX54-207ENST00000550016 SCNM1Q9BWG6 230 aa18.99■□□□□ 0.63
DDX54-207ENST00000550016 STN1Q9H668 368 aaKnown RBP18.99■□□□□ 0.63
DDX54-207ENST00000550016 SARS2Q9NP81 518 aaKnown RBP18.99■□□□□ 0.63
DDX54-207ENST00000550016 GRHL1Q9NZI5 618 aa18.99■□□□□ 0.63
DDX54-207ENST00000550016 CPNE7Q9UBL6 633 aa18.99■□□□□ 0.63
DDX54-207ENST00000550016 TEX264Q9Y6I9 313 aa18.99■□□□□ 0.63
DDX54-207ENST00000550016 NCOR2Q9Y618 2525 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 FAM221BA6H8Z2 402 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 PRMT5O14744 637 aaPredicted RBP18.98■□□□□ 0.63
DDX54-207ENST00000550016 FTH1P02794 183 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 JUPP14923 745 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 OGNP20774 298 aaKnown RBP18.98■□□□□ 0.63
DDX54-207ENST00000550016 ELK3P41970 407 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 HALP42357 657 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 CCL7P80098 99 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 HHEXQ03014 270 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 CRYMQ14894 314 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 ZNF658BQ4V348 819 aaPredicted RBP18.98■□□□□ 0.63
DDX54-207ENST00000550016 SPANXN3Q5MJ09 141 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 CDCP2Q5VXM1 449 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 SPRED1Q7Z699 444 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 CACTIN-AS1Q8N1I8 211 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 SH3KBP1Q96B97 665 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 LRRN3Q9H3W5 708 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 C20orf96Q9NUD7 363 aaPredicted RBP18.98■□□□□ 0.63
DDX54-207ENST00000550016 IL1RAPL1Q9NZN1 696 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 ZNF624Q9P2J8 865 aaPredicted RBP18.98■□□□□ 0.63
DDX54-207ENST00000550016 FAM8A1Q9UBU6 413 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 ANGPTL2Q9UKU9 493 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 WDR37Q9Y2I8 494 aa18.98■□□□□ 0.63
DDX54-207ENST00000550016 KIF26BQ2KJY2 2108 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 NTN3O00634 580 aaPredicted RBP18.97■□□□□ 0.63
DDX54-207ENST00000550016 MT-CO3P00414 261 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 SPINK2P20155 84 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 ALDH4A1P30038 563 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 SLC19A1P41440 591 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 OR1D5P58170 312 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 UBE2IP63279 158 aaKnown RBP18.97■□□□□ 0.63
DDX54-207ENST00000550016 SLC7A5Q01650 507 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 CAV1Q03135 178 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 PDIA2Q13087 525 aaKnown RBP18.97■□□□□ 0.63
DDX54-207ENST00000550016 CLCA4Q14CN2 919 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 TYSND1Q2T9J0 566 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 HP1BP3Q5SSJ5 553 aaPredicted RBP18.97■□□□□ 0.63
DDX54-207ENST00000550016 RNF187Q5TA31 235 aaPredicted RBP18.97■□□□□ 0.63
DDX54-207ENST00000550016 ZNF449Q6P9G9 518 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 XKR5Q6UX68 686 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 LRRC6Q86X45 466 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 CILP2Q8IUL8 1156 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 TRIM48Q8IWZ4 208 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 LMNTD2Q8IXW0 634 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 CEP112Q8N8E3 955 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 CALML6Q8TD86 181 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 ART4Q93070 314 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 WWP1Q9H0M0 922 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 COG4Q9H9E3 785 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 ZC3H7BQ9UGR2 993 aaKnown RBP18.97■□□□□ 0.63
DDX54-207ENST00000550016 KLK13Q9UKR3 277 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 PSMD13Q9UNM6 376 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 CHMP2BQ9UQN3 213 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 NEUROG3Q9Y4Z2 214 aa18.97■□□□□ 0.63
DDX54-207ENST00000550016 E7ESA3 106 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 B4GAT1O43505 415 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 TCEA3O75764 348 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 VIPP01282 170 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 RPLP0P05388 317 aaKnown RBP18.96■□□□□ 0.63
DDX54-207ENST00000550016 RPS3P23396 243 aaKnown RBP eCLIP18.96■□□□□ 0.63
DDX54-207ENST00000550016 CLDN6P56747 220 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 RPA4Q13156 261 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 RPE65Q16518 533 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 ZNF470Q6ECI4 717 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 CENPUQ71F23 418 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 LILRA3Q8N6C8 439 aaPredicted RBP18.96■□□□□ 0.63
DDX54-207ENST00000550016 DCBLD1Q8N8Z6 715 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 NOA1Q8NC60 698 aaKnown RBP18.96■□□□□ 0.63
DDX54-207ENST00000550016 CXorf40BQ96DE9 158 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 GFM1Q96RP9 751 aaKnown RBP18.96■□□□□ 0.63
DDX54-207ENST00000550016 SLC38A3Q99624 504 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 CARD6Q9BX69 1037 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 TSSK1BQ9BXA7 367 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.96■□□□□ 0.63
DDX54-207ENST00000550016 P2RY12Q9H244 342 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 UCK1Q9HA47 277 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 INTS10Q9NVR2 710 aaKnown RBP18.96■□□□□ 0.63
DDX54-207ENST00000550016 GNPTGQ9UJJ9 305 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 CLCA2Q9UQC9 943 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 VPS9D1Q9Y2B5 631 aa18.96■□□□□ 0.63
DDX54-207ENST00000550016 A0A1W2PQM1 296 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 UBA6A0AVT1 1052 aaPredicted RBP18.95■□□□□ 0.62
DDX54-207ENST00000550016 FAM149AA5PLN7 773 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 OR52A4PA6NMU1 304 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 LIN7AO14910 233 aaPredicted RBP18.95■□□□□ 0.62
DDX54-207ENST00000550016 S1PR4O95977 384 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 SLC35G4P0C7Q5 338 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 PLTPP55058 493 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 SPIDRQ14159 915 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 TRADDQ15628 312 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 HSP90AA5PQ58FG0 334 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 PTRHD1Q6GMV3 140 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms