RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 YAP1P46937 504 aaKnown RBP14.79□□□□□ -0.04
CUX1-214ENST00000550008 CDKN1CP49918 316 aaPredicted RBP14.79□□□□□ -0.04
CUX1-214ENST00000550008 UFM1P61960 85 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 CREMQ03060 361 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 GPR107Q5VW38 600 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 PSRC1Q6PGN9 363 aaPredicted RBP14.79□□□□□ -0.04
CUX1-214ENST00000550008 STX19Q8N4C7 294 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 NACC2Q96BF6 587 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 REXO5Q96IC2 774 aaKnown RBP14.79□□□□□ -0.04
CUX1-214ENST00000550008 DUSP12Q9UNI6 340 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 BBIP1A8MTZ0 92 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 ADAM12O43184 909 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 KERAO60938 352 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 COL6A1P12109 1028 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 SULT2A1Q06520 285 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 RANBP10Q6VN20 620 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 ZNF557Q8N988 423 aaPredicted RBP14.79□□□□□ -0.04
CUX1-214ENST00000550008 C1orf74Q96LT6 269 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 PSKH2Q96QS6 385 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 PCDH10Q9P2E7 1040 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 SLCO3A1Q9UIG8 710 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 GJD2Q9UKL4 321 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 S1PR4O95977 384 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 ADH1CP00326 375 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 CLTBP09497 229 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 DGKGP49619 791 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 DLG1Q12959 904 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 ALKAL1Q6UXT8 129 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 SNX20Q7Z614 316 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 PATL1Q86TB9 770 aaKnown RBP14.79□□□□□ -0.04
CUX1-214ENST00000550008 C20orf27Q9GZN8 174 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 H2AFY2Q9P0M6 372 aaPredicted RBP14.79□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D14Q9P2M4 693 aa14.79□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3DA0A087WVF3 549 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3IA0A087WXS9 549 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3EA0A087X179 549 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3KA0A087X1G2 549 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 A0A0G2JN53 185 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3FA6NER0 549 aaPredicted RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3LB9A6J9 549 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 KDELR3O43731 214 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 GABBR2O75899 941 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 FGF18O76093 207 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 SLC35G4P0C7Q5 338 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3HP0C7X1 549 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 PRDX6P30041 224 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 S100A5P33763 92 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 CAP1Q01518 475 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 ZNF33AQ06730 810 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 RFTN1Q14699 578 aaPredicted RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 MAPK11Q15759 364 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 LY6G5CQ5SRR4 150 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 LRRC66Q68CR7 880 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3GQ6DHY5 549 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3CQ6IPX1 549 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TBC1D3Q8IZP1 549 aaPredicted RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 TMCO5AQ8N6Q1 288 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 SORCS1Q8WY21 1168 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TUBGCP5Q96RT8 1024 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 OSBPL11Q9BXB4 747 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 ZBTB26Q9HCK0 441 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 RAB23Q9ULC3 237 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 NME7Q9Y5B8 376 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 ISM1B1AKI9 464 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 M0QZQ0 153 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 MAP3K13O43283 966 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 ATG13O75143 517 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 SLC2A7Q6PXP3 512 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 Q6ZVL8 140 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 ZNF534Q76KX8 674 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 MRPL10Q7Z7H8 261 aaKnown RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 RORBQ92753 470 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 NELL1Q92832 810 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 REPS1Q96D71 796 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 CCDC3Q9BQI4 270 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TMEM30AQ9NV96 361 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 SDHDO14521 159 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 RNASEH2AO75792 299 aaKnown RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 IFNA14P01570 189 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 PPP2R1BP30154 601 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 MTHFRP42898 656 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 GRASPQ7Z6J2 395 aaPredicted RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 ARHGAP12Q8IWW6 846 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 OLIG1Q8TAK6 271 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 ITCHQ96J02 903 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 RIOK2Q9BVS4 552 aaKnown RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 CCDC106Q9BWC9 280 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 OR2AG1Q9H205 316 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 RASSF1Q9NS23 344 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 CACNA2D2Q9NY47 1150 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 SLC22A14Q9Y267 594 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 CFAP20Q9Y6A4 193 aaKnown RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 BCL10O95999 233 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 ATP1A4Q13733 1029 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TEAD2Q15562 447 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 TGFBIQ15582 683 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 OR4F6Q8NGB9 312 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 CSGALNACT1Q8TDX6 532 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 PKP2Q99959 881 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms