RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TTLL3Q9Y4R7 772 aa11.97□□□□□ -0.49
DDX54-206ENST00000549271 hCG_1818297A0A087WSY0 165 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 HEATR9A2RTY3 570 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 BTNL10A8MVZ5 291 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 TOX3O15405 576 aaPredicted RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 PJA2O43164 708 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 GRID2O43424 1007 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 ZRANB2O95218 330 aaKnown RBP eCLIP11.96□□□□□ -0.49
DDX54-206ENST00000549271 ACP5P13686 325 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 PECAM1P16284 738 aaPredicted RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 MAPK9P45984 424 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 NR2C2P49116 596 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 GFERP55789 205 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 DCDC1P59894 354 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 RPS18P62269 152 aaKnown RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 TFDP2Q14188 446 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 PRKD1Q15139 912 aaPredicted RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 ZRSR2Q15696 482 aaKnown RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 PLEKHN1Q494U1 663 aaPredicted RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.96□□□□□ -0.49
DDX54-206ENST00000549271 ODF2Q5BJF6 829 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 TFDP3Q5H9I0 405 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 KAZNQ674X7 775 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 PDPK2PQ6A1A2 396 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 SYVN1Q86TM6 617 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 PLXDC1Q8IUK5 500 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 IQCKQ8N0W5 287 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 ACRBPQ8NEB7 543 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 FDCSPQ8NFU4 85 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 EID2BQ96D98 161 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 IMP4Q96G21 291 aaKnown RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 AGAP3Q96P47 875 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 BARD1Q99728 777 aaKnown RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 NUDT9Q9BW91 350 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 TBC1D10AQ9BXI6 508 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 ADGRE3Q9BY15 652 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 TRIM39Q9HCM9 518 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 LUC7LQ9NQ29 371 aaKnown RBP11.96□□□□□ -0.49
DDX54-206ENST00000549271 ATXN10Q9UBB4 475 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 KCNK6Q9Y257 313 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 PRKAB1Q9Y478 270 aa11.96□□□□□ -0.49
DDX54-206ENST00000549271 MDC1Q14676 2089 aaKnown RBP11.96□□□□□ -0.5
DDX54-206ENST00000549271 PPP1R12AO14974 1030 aaPredicted RBP11.95□□□□□ -0.5
DDX54-206ENST00000549271 CHUKO15111 745 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 ZNF8P17098 575 aaPredicted RBP11.95□□□□□ -0.5
DDX54-206ENST00000549271 XRCC1P18887 633 aaPredicted RBP11.95□□□□□ -0.5
DDX54-206ENST00000549271 LPOP22079 712 aaPredicted RBP11.95□□□□□ -0.5
DDX54-206ENST00000549271 PTPN3P26045 913 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 PTPN4P29074 926 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 CDC25BP30305 580 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 PTGIRP43119 386 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 WASHC5Q12768 1159 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 TEX44Q53QW1 395 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 CRB2Q5IJ48 1285 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 TMC3Q7Z5M5 1100 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 DAAM2Q86T65 1068 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 NT5DC3Q86UY8 548 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 PHYKPLQ8IUZ5 450 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.95□□□□□ -0.5
DDX54-206ENST00000549271 ADAMTS17Q8TE56 1095 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 ELMO2Q96JJ3 720 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 LURAP1Q96LR2 239 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 PLEKHG4BQ96PX9 1271 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 TRIB3Q96RU7 358 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 SMAD5Q99717 465 aaKnown RBP11.95□□□□□ -0.5
DDX54-206ENST00000549271 BAG1Q99933 345 aaPredicted RBP11.95□□□□□ -0.5
DDX54-206ENST00000549271 ANP32EQ9BTT0 268 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 ZSCAN5AQ9BUG6 496 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 SLC25A51Q9H1U9 297 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 RUBCNLQ9H714 662 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 AKIRIN1Q9H9L7 192 aaPredicted RBP11.95□□□□□ -0.5
DDX54-206ENST00000549271 ZFYVE1Q9HBF4 777 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 GLOD4Q9HC38 313 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 MAGEE1Q9HCI5 957 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 RAD18Q9NS91 495 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 OGFRQ9NZT2 677 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 PCDHA3Q9Y5H8 950 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 PKDREJQ9NTG1 2253 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 PCSK5Q92824 1860 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 ZGRF1Q86YA3 2104 aa11.95□□□□□ -0.5
DDX54-206ENST00000549271 A0A0U1RQJ8 604 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 SNX2O60749 519 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 TIAF1O95411 115 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 ITGA3P26006 1051 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 CD68P34810 354 aaPredicted RBP11.94□□□□□ -0.5
DDX54-206ENST00000549271 CTNNA1P35221 906 aaKnown RBP11.94□□□□□ -0.5
DDX54-206ENST00000549271 VAV2P52735 878 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 ELOAQ14241 798 aaKnown RBP11.94□□□□□ -0.5
DDX54-206ENST00000549271 TESK1Q15569 626 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 SLC14A2Q15849 920 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 PPP2R5EQ16537 467 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 WASH2PQ6VEQ5 465 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 TMEM26Q6ZUK4 368 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 BBS12Q6ZW61 710 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 BZW1Q7L1Q6 419 aaKnown RBP11.94□□□□□ -0.5
DDX54-206ENST00000549271 ADGRG6Q86SQ4 1221 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 PPP1R3BQ86XI6 285 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 CISD2Q8N5K1 135 aaKnown RBP11.94□□□□□ -0.5
DDX54-206ENST00000549271 TRAM1L1Q8N609 369 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms