RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 IL27RAQ6UWB1 636 aa18.26■□□□□ 0.51
PRPF40B-208ENST00000548436 PROKR1Q8TCW9 393 aa18.26■□□□□ 0.51
PRPF40B-208ENST00000548436 SLC29A1Q99808 456 aa18.26■□□□□ 0.51
PRPF40B-208ENST00000548436 SLC24A3Q9HC58 644 aa18.26■□□□□ 0.51
PRPF40B-208ENST00000548436 TLR9Q9NR96 1032 aa18.26■□□□□ 0.51
PRPF40B-208ENST00000548436 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRPF40B-208ENST00000548436 ARMC1Q9NVT9 282 aa18.26■□□□□ 0.51
PRPF40B-208ENST00000548436 PTBP2Q9UKA9 531 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-208ENST00000548436 A0A1W2PRU2 124 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 NPIPB15A6NHN6 443 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 CCDC154A6NI56 674 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 ENO4A6NNW6 628 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 KATNA1O75449 491 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 ITGB8P26012 769 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 HSPA7P48741 367 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 WDR5P61964 334 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 IRAK1BP1Q5VVH5 260 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 MYO1HQ8N1T3 1032 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 TMEM199Q8N511 208 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 OR2AP1Q8NGE2 309 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 C19orf43Q9BQ61 176 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 EFHD1Q9BUP0 239 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 TRIM54Q9BYV2 358 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 IPPKQ9H8X2 491 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 CCM2LQ9NUG4 571 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 ZIM2Q9NZV7 527 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 CRLS1Q9UJA2 301 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 ZNF510Q9Y2H8 683 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 OARD1Q9Y530 152 aa18.25■□□□□ 0.51
PRPF40B-208ENST00000548436 GLUD1P00367 558 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 S100BP04271 92 aaPredicted RBP18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 SRCP12931 536 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 SPAM1P38567 509 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 RGS4P49798 205 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 MYBPC1Q00872 1141 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 BNIP2Q12982 314 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 TRAF3Q13114 568 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 PHKG1Q16816 387 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 GPRC6AQ5T6X5 926 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 LCN8Q6JVE9 175 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 CMTM8Q8IZV2 173 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 GPR26Q8NDV2 337 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 PPWD1Q96BP3 646 aaKnown RBP18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 LMLNQ96KR4 655 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 ZNF597Q96LX8 424 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 CIB1Q99828 191 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 FAM126AQ9BYI3 521 aaPredicted RBP18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 SLC2A11Q9BYW1 496 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 ACTR3BQ9P1U1 418 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 AQP12BA6NM10 295 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 LEFTY2O00292 366 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 DGKAP23743 735 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 SERPINA4P29622 427 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 ABRAXAS2Q15018 415 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 TIGD2Q4W5G0 525 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 CRTC1Q6UUV9 634 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 MACC1Q6ZN28 852 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 AQP12AQ8IXF9 295 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 KIAA2013Q8IYS2 634 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 ADGRG2Q8IZP9 1017 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 ZBTB2Q8N680 514 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 CENPKQ9BS16 269 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 APOL5Q9BWW9 433 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 ZBP1Q9H171 429 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 ZMYM5Q9UJ78 669 aa18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 LEF1Q9UJU2 399 aaPredicted RBP18.24■□□□□ 0.51
PRPF40B-208ENST00000548436 TRAV19A0A0A6YYK7 116 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 FAM234BA2RU67 622 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 H0YJX3 145 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 LSM1O15116 133 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 ARPC2O15144 300 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 LRG1P02750 347 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 CHRM1P11229 460 aaPredicted RBP18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 CSF2RAP15509 400 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 CASP2P42575 452 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 GDF5P43026 501 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 GSK3BP49841 420 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 FUT11Q495W5 492 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 LYPLAL1Q5VWZ2 237 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 GRAMD4Q6IC98 578 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 ERMP1Q7Z2K6 904 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 NXPE1Q8N323 547 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 CBARPQ8N350 705 aaPredicted RBP18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 NUDT8Q8WV74 236 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 TMEM74Q96NL1 305 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 TMEM79Q9BSE2 394 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 SLC46A2Q9BY10 475 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 HEBP1Q9NRV9 189 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 WBP1LQ9NX94 342 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 AURKCQ9UQB9 309 aa18.23■□□□□ 0.51
PRPF40B-208ENST00000548436 DHRS12A0PJE2 317 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 AKAP10O43572 662 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 BNIP3LO60238 219 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 FGF18O76093 207 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 PGM3O95394 542 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 OTCP00480 354 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 CKMT2P17540 419 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 HLA-FP30511 346 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 RFC2P35250 354 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 GPR33Q49SQ1 333 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms