RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 RPS9P46781 194 aaKnown RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 RXRGP48443 463 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 INHBCP55103 352 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CAPSQ13938 189 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 SYT16Q17RD7 645 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ANKDD1AQ495B1 522 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 FGD3Q5JSP0 725 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CEP78Q5JTW2 689 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 C10orf62Q5T681 223 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PTRHD1Q6GMV3 140 aaKnown RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 LETMD1Q6P1Q0 360 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CCDC149Q6ZUS6 474 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 AKAP14Q86UN6 197 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CUZD1Q86UP6 607 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 XYLT1Q86Y38 959 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ZC3H7AQ8IWR0 971 aaKnown RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 FBXO39Q8N4B4 442 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 KREMEN2Q8NCW0 462 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 OR2T34Q8NGX1 318 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 OR2T3Q8NH03 318 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CLHC1Q8NHS4 586 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 KCTD13Q8WZ19 329 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ZNF512Q96ME7 567 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 MRPL45Q9BRJ2 306 aaKnown RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 COPS4Q9BT78 406 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 TLE6Q9H808 572 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 COMMD8Q9NX08 183 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 HMGXB4Q9UGU5 601 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ZNHIT2Q9UHR6 403 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ZDHHC2Q9UIJ5 367 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 SLC30A1Q9Y6M5 507 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 KIF26AQ9ULI4 1882 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 TRIM64CA6NLI5 447 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ZBTB14O43829 449 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 RFPL1O75677 317 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 SERPINI2O75830 405 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 SOAT2O75908 522 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ALX3O95076 343 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 STBD1O95210 358 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 IL18RAPO95256 599 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 MT-CYBP00156 380 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 BPIP17213 487 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 S100A1P23297 94 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PAX3P23760 479 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PCSK6P29122 969 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 AKT1P31749 480 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 MS4A2Q01362 244 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 SOX4Q06945 474 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CEACAM7Q14002 265 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 TGFBIQ15582 683 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 MGAT5BQ3V5L5 792 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ZNF280DQ6N043 979 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PMF1Q6P1K2 205 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ANKRD33Q7Z3H0 272 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PIWIL4Q7Z3Z4 852 aaKnown RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 LINC00523Q86TU6 105 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 TTC30AQ86WT1 665 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 FBXO16Q8IX29 292 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ADGRF2Q8IZF7 708 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 EID3Q8N140 333 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 TERB1Q8NA31 727 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 B3GALNT2Q8NCR0 500 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 DNERQ8NFT8 737 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 FNDC8Q8TC99 324 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 HDAC10Q969S8 669 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CCDC126Q96EE4 140 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 MAGED4Q96JG8 741 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 FAM193BQ96PV7 902 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CSPG4P5Q96PW8 444 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 RBBP8Q99708 897 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 FOXQ1Q9C009 403 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ZNF556Q9HAH1 456 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 RPRD1BQ9NQG5 326 aaKnown RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PRMT7Q9NVM4 692 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 DNAJC28Q9NX36 388 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PCDHB12Q9Y5F1 795 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 SNX10Q9Y5X0 201 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 TEX264Q9Y6I9 313 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 A8MX80 341 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 HAS3O00219 553 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 BTN3A1O00481 513 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 MAFGO15525 162 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 MFSD11O43934 449 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 SNAP91O60641 907 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ABLIM3O94929 683 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PGLSO95336 258 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 TFAP2AP05549 437 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ATP5BP06576 529 aaKnown RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 NAT2P11245 290 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 CYP2C9P11712 490 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ELNP15502 786 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 LBPP18428 481 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 RAB6AP20340 208 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 XPAP23025 273 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-203ENST00000547825 FMO4P31512 558 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 ICAM3P32942 547 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 IL12RB1P42701 662 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 MAGEA8P43361 318 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 PRKAA2P54646 552 aa5.42□□□□□ -1.54
LIMA1-203ENST00000547825 RAB10P61026 200 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms