RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 LIMA1Q9UHB6 759 aaKnown RBP3.68□□□□□ -1.82
CCDC38-204ENST00000546816 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 TMEM8BA6NDV4 472 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 GPR137BO60478 399 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 SORBS2O94875 1100 aaKnown RBP3.67□□□□□ -1.82
CCDC38-204ENST00000546816 CSPG5O95196 566 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 EML2O95834 649 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 AGR2O95994 175 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 WNT5AP41221 380 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 PIK3CAP42336 1068 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 GPR143P51810 404 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 RPS3AP61247 264 aaKnown RBP3.67□□□□□ -1.82
CCDC38-204ENST00000546816 TFAP4Q01664 338 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 MED22Q15528 200 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 TSTQ16762 297 aaKnown RBP3.67□□□□□ -1.82
CCDC38-204ENST00000546816 BHLHB9Q6PI77 547 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 DENND5BQ6ZUT9 1274 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 ZNF440Q8IYI8 595 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 HACE1Q8IYU2 909 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 CRYBG2Q8N1P7 616 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 ARHGEF2Q92974 986 aaKnown RBP3.67□□□□□ -1.82
CCDC38-204ENST00000546816 GMPPAQ96IJ6 420 aaPredicted RBP3.67□□□□□ -1.82
CCDC38-204ENST00000546816 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 PSMD1Q99460 953 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 TRIM15Q9C019 465 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 ATAD3AQ9NVI7 634 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 C9orf78Q9NZ63 289 aaPredicted RBP3.67□□□□□ -1.82
CCDC38-204ENST00000546816 COQ3Q9NZJ6 369 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 PGAP2Q9UHJ9 254 aa3.67□□□□□ -1.82
CCDC38-204ENST00000546816 DBNLQ9UJU6 430 aaKnown RBP3.67□□□□□ -1.82
CCDC38-204ENST00000546816 A0A0J9YWU9 116 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 H7C423 109 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 TPOP07202 933 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 FAM157CP0CG43 387 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 DPEP1P16444 411 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 CKMT2P17540 419 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 BMXP51813 675 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 PPARDQ03181 441 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 GOLGA8DPQ0D2H9 430 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 LRMPQ12912 555 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 MEP1AQ16819 746 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 FAM109BQ6ICB4 259 aaPredicted RBP3.66□□□□□ -1.82
CCDC38-204ENST00000546816 GALNT13Q8IUC8 556 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 SCML4Q8N228 414 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 MOCOSQ96EN8 888 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 C1orf74Q96LT6 269 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 RPS10P5Q9NQ39 176 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 RRP7BPQ9NSQ0 103 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 ECHDC1Q9NTX5 307 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 SETD4Q9NVD3 440 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 ASIC3Q9UHC3 531 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 TMEM98Q9Y2Y6 226 aa3.66□□□□□ -1.82
CCDC38-204ENST00000546816 COL5A2P05997 1499 aaPredicted RBP3.66□□□□□ -1.82
CCDC38-204ENST00000546816 OR6C76A6NM76 312 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 SCAMP1O15126 338 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 OGG1O15527 345 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 TPD52L2O43399 206 aaKnown RBP3.65□□□□□ -1.83
CCDC38-204ENST00000546816 TMCC2O75069 709 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 GAGE2BQ13066 116 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 PRKAA1Q13131 559 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 EIF4A2Q14240 407 aaKnown RBP3.65□□□□□ -1.83
CCDC38-204ENST00000546816 GTDC1Q4AE62 458 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 GAGE2EQ4V326 116 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 TCTE1Q5JU00 501 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 INTS11Q5TA45 600 aaKnown RBP3.65□□□□□ -1.83
CCDC38-204ENST00000546816 ALS2CLQ60I27 953 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 GAGE2AQ6NT46 116 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 NCEH1Q6PIU2 408 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 CFAP77Q6ZQR2 320 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 CLEC17AQ6ZS10 378 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 FASTKD5Q7L8L6 764 aaKnown RBP3.65□□□□□ -1.83
CCDC38-204ENST00000546816 ISCA2Q86U28 154 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 GPALPP1Q8IXQ4 340 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 L3MBTL4Q8NA19 623 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 PPHLN1Q8NEY8 458 aaKnown RBP3.65□□□□□ -1.83
CCDC38-204ENST00000546816 FAM222BQ8WU58 562 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 ELMOD3Q96FG2 381 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 OR2A14Q96R47 310 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 SLC22A12Q96S37 553 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 SEC62Q99442 399 aaKnown RBP3.65□□□□□ -1.83
CCDC38-204ENST00000546816 VGLL1Q99990 258 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 DENND2DQ9H6A0 471 aaPredicted RBP3.65□□□□□ -1.83
CCDC38-204ENST00000546816 EHD2Q9NZN4 543 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 KLHL8Q9P2G9 620 aaPredicted RBP3.65□□□□□ -1.83
CCDC38-204ENST00000546816 GAGE2DQ9UEU5 116 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 RABGAP1Q9Y3P9 1069 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 PIAS3Q9Y6X2 628 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 RUSC2Q8N2Y8 1516 aa3.65□□□□□ -1.83
CCDC38-204ENST00000546816 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 TMEM63AO94886 807 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 RTN3O95197 1032 aaPredicted RBP3.64□□□□□ -1.83
CCDC38-204ENST00000546816 CEACAM8P31997 349 aaPredicted RBP3.64□□□□□ -1.83
CCDC38-204ENST00000546816 KCNJ10P78508 379 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 PCGF3Q3KNV8 242 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 ZDHHC20Q5W0Z9 365 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 JADE1Q6IE81 842 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 FAAP20Q6NZ36 180 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 ZNF611Q8N823 705 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 OR2T6Q8NHC8 308 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms