RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 H7C0S8 307 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 CACNB4O00305 520 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 CCL22O00626 93 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 GAPDHSO14556 408 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TOR1BO14657 336 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 VILLO15195 856 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 LRP3O75074 770 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 BANF1O75531 89 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 BPNT1O95861 308 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 WNT1P04628 370 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 RHOXF2BP0C7M4 288 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 THEGLP0DJG4 465 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 MYCLP1P12525 358 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ITGALP20701 1170 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ADRA1DP25100 572 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 GPR1P46091 355 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 NPY2RP49146 381 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 CSNK1EP49674 416 aaKnown RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 THOP1P52888 689 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ARL4CP56559 192 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 C21orf59P57076 290 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 NXPH1P58417 271 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 KIAA1024LP59773 190 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TMPRSS15P98073 1019 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 CAV1Q03135 178 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ACVR1Q04771 509 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 GRIK2Q13002 908 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 NFATC2Q13469 925 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ITGA9Q13797 1035 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 PDE1CQ14123 709 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 PTPRCAPQ14761 206 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 NFATC4Q14934 902 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 CCDC6Q16204 474 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 DUOXA1Q1HG43 343 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 SKIDA1Q1XH10 827 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 BBS9Q3SYG4 887 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ATP13A5Q4VNC0 1218 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 PCID2Q5JVF3 399 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TMEM201Q5SNT2 666 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TPRG1LQ5T0D9 272 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TSTD2Q5T7W7 516 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 PNCKQ6P2M8 343 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 SLC23A3Q6PIS1 610 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 AFTPHQ6ULP2 937 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ZDHHC24Q6UX98 284 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 Q6ZSR6 202 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TRIM74Q86UV6 250 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 PARGQ86W56 976 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 MPP5Q8N3R9 675 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TRAM1L1Q8N609 369 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 CEP76Q8TAP6 659 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 FBXO25Q8TCJ0 367 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 STYXQ8WUJ0 223 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ART4Q93070 314 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 SKA1Q96BD8 255 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF669Q96BR6 464 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 STAMBPL1Q96FJ0 436 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 PDXPQ96GD0 296 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 BMFQ96LC9 184 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF778Q96MU6 729 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 AGAP2Q99490 1192 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 RHOXF2Q9BQY4 288 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 WDR83Q9BRX9 315 aaKnown RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 KIFC1Q9BW19 673 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 SPATA16Q9BXB7 569 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 FAM129AQ9BZQ8 928 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 SMOC1Q9H4F8 434 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 FAM83DQ9H4H8 585 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 IL26Q9NPH9 171 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 PHPT1Q9NRX4 125 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 FAM114A2Q9NRY5 505 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 TREX1Q9NSU2 369 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 NLE1Q9NVX2 485 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-211ENST00000546304 SMOXQ9NWM0 555 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 SLC2A6Q9UGQ3 507 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 APPL1Q9UKG1 709 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 ADAMTS6Q9UKP5 1117 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 RIMKLBQ9ULI2 386 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 CHMP2BQ9UQN3 213 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 MAD1L1Q9Y6D9 718 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 DCHS1Q96JQ0 3298 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 FAM237BA0A1B0GVD1 139 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CCDC162PA2VCL2 907 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 OR51F1A6NGY5 319 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 SDR42E2A6NKP2 422 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 E7ESA3 106 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 TLR4O00206 839 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 INPP4BO15327 924 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 MAGEC1O60732 1142 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 SRP72O76094 671 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 USP1O94782 785 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 SLU7O95391 586 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 CER1O95813 267 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PGAM1P18669 254 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PAMP19021 973 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 KELP23276 732 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 PSMA3P25788 255 aa6.26□□□□□ -1.41
PRKDC-211ENST00000546304 HTR1BP28222 390 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms