RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	COL24A1	Q17RW2	1714 aa		4.06	□□□□□ -1.76
SNHG1-222	ENST00000545308	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.06	□□□□□ -1.76
SNHG1-222	ENST00000545308	CCDC7	Q96M83	1385 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	TRAV34	A0A0B4J273	112 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308		A0A1W2PPM1	405 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308		I6L893	689 aa	Predicted RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	PPP6C	O00743	305 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	CELF2	O95319	508 aa	Known RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	EGF	P01133	1207 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	PENK	P01210	267 aa	Predicted RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	GH2	P01242	217 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	IFNA2	P01563	188 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	CD58	P19256	250 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	GNLY	P22749	145 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	GPT	P24298	496 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	ARHGAP25	P42331	645 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	RAB28	P51157	221 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	P2RX3	P56373	397 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	SIRPA	P78324	504 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	ID2	Q02363	134 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	PPP2R5C	Q13362	524 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	MTX1	Q13505	466 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	NEDD9	Q14511	834 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	ZNF273	Q14593	569 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	INPP5J	Q15735	1006 aa	Predicted RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	EFNB3	Q15768	340 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	FAM98B	Q52LJ0	330 aa	Known RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	DCAF6	Q58WW2	860 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	MTX3	Q5HYI7	312 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	LCN10	Q6JVE6	187 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	C11orf87	Q6NUJ2	197 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	PLBD1	Q6P4A8	553 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	PAPD4	Q6PIY7	484 aa	Known RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	CACNA2D4	Q7Z3S7	1137 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	PATL1	Q86TB9	770 aa	Known RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	FOXRED2	Q8IWF2	684 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	BEST3	Q8N1M1	668 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	RASGEF1C	Q8N431	466 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	CARNMT1	Q8N4J0	409 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	OR1J2	Q8NGS2	313 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	GDAP1	Q8TB36	358 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	AFAP1L1	Q8TED9	768 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	INPP5D	Q92835	1189 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	APBB2	Q92870	758 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	FAM162A	Q96A26	154 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	RHBDF1	Q96CC6	855 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	ARSG	Q96EG1	525 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	DACH2	Q96NX9	599 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	GFM1	Q96RP9	751 aa	Known RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	ABHD6	Q9BV23	337 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	SPRY4	Q9C004	299 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	CNOT10	Q9H9A5	744 aa	Known RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	PFDN4	Q9NQP4	134 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	MBNL1	Q9NR56	388 aa	Known RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	TMEM51	Q9NW97	253 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	TAS2R14	Q9NYV8	317 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	UBA2	Q9UBT2	640 aa	Predicted RBP	4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	TSPYL4	Q9UJ04	414 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	ACSL5	Q9ULC5	683 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	COG5	Q9UP83	839 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	SNX5	Q9Y5X3	404 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	LIPG	Q9Y5X9	500 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	POMT1	Q9Y6A1	747 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	TOPAZ1	Q8N9V7	1692 aa		4.05	□□□□□ -1.76
SNHG1-222	ENST00000545308	WDR90	Q96KV7	1748 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	PEAK1	Q9H792	1746 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	CRYBG1	Q9Y4K1	1723 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	POLR3A	O14802	1390 aa	Predicted RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	PLEKHH1	Q9ULM0	1364 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	ACE	P12821	1306 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	ZNF541	Q9H0D2	1346 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308		A0A0B4J293	547 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	KDM4E	B2RXH2	506 aa	Predicted RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308		B4DGG1	531 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	KCNAB3	O43448	404 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	DDN	O94850	711 aa	Predicted RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	KLKB1	P03952	638 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	CYP19A1	P11511	503 aa	Predicted RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	ACHE	P22303	614 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	NMBR	P28336	390 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	HOXC13	P31276	330 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	HNRNPH1	P31943	449 aa	Known RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	KRT2	P35908	639 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	APOBEC1	P41238	236 aa	Known RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	NFE2L1	Q14494	772 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	ARMC4	Q5T2S8	1044 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	PET117	Q6UWS5	81 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	INTS8	Q75QN2	995 aa	Known RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	CCDC190	Q86UF4	302 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	NRROS	Q86YC3	692 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	FBXO39	Q8N4B4	442 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	SETD6	Q8TBK2	473 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	TRIB2	Q92519	343 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	MR1	Q95460	341 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	APOLD1	Q96LR9	279 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	GFI1	Q99684	422 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	OLFM1	Q99784	485 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms