RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MMP2P08253 660 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 PIRTP0C851 137 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 EDN3P14138 238 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 ARL4AP40617 200 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 KPNA2P52292 529 aaKnown RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 RPL26P61254 145 aaKnown RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 ART3Q13508 389 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 SYCP1Q15431 976 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 HIF1AQ16665 826 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 FAM182AQ5T1J6 154 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 TXNRD3NBQ6F5E7 133 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 DUS1LQ6P1R4 473 aaKnown RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 KLHL35Q6PF15 583 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 FAM83HQ6ZRV2 1179 aaPredicted RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 TRAM1L1Q8N609 369 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 CCHCR1Q8TD31 782 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 ITLN2Q8WWU7 325 aaPredicted RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 HSPH1Q92598 858 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 TRAPPC9Q96Q05 1148 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 SYT11Q9BT88 431 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 ZSCAN5AQ9BUG6 496 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 NUP85Q9BW27 656 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 TRIM8Q9BZR9 551 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 RUBCNLQ9H714 662 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 ACTR5Q9H9F9 607 aaPredicted RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 PCDH18Q9HCL0 1135 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD4-212ENST00000545083 PARVAQ9NVD7 372 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 RBM22Q9NW64 420 aaKnown RBP eCLIP9.15□□□□□ -0.947e-6■■■■□ 24.6
CHD4-212ENST00000545083 SOHLH2Q9NX45 425 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 NOVA2Q9UNW9 492 aaKnown RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 RPL26L1Q9UNX3 145 aaKnown RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 SHOC2Q9UQ13 582 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 TTLL3Q9Y4R7 772 aa9.15□□□□□ -0.94
CHD4-212ENST00000545083 CFAP20Q9Y6A4 193 aaKnown RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 ANKHD1Q8IWZ3 2542 aaKnown RBP9.15□□□□□ -0.94
CHD4-212ENST00000545083 FBN3Q75N90 2809 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 SLC9B1P1A6NJY1 282 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 TMEM150CB9EJG8 249 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 LDB2O43679 373 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 VEGFDO43915 354 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 CNOT3O75175 753 aaKnown RBP9.14□□□□□ -0.95
CHD4-212ENST00000545083 SLC4A1P02730 911 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 RARAP10276 462 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 BPIP17213 487 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 CYP2A7P20853 494 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
CHD4-212ENST00000545083 SERPINB6P35237 376 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 PTGER4P35408 488 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 HALP42357 657 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 CTSCP53634 463 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 SOX8P57073 446 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 DCDC1P59894 354 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 KRTAP10-9P60411 292 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 GALNT3Q14435 633 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 TMTC4Q5T4D3 741 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 TRAPPC5Q8IUR0 188 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 ZNF295-AS1Q8N0V1 137 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 CLEC1AQ8NC01 280 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 FAR1Q8WVX9 515 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 TM9SF4Q92544 642 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 FER1L6-AS2Q96M78 137 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 WDR77Q9BQA1 342 aaPredicted RBP9.14□□□□□ -0.95
CHD4-212ENST00000545083 ZFYVE1Q9HBF4 777 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 IMP3Q9NV31 184 aaKnown RBP9.14□□□□□ -0.95
CHD4-212ENST00000545083 P4HTMQ9NXG6 502 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 NFKBIL1Q9UBC1 381 aaPredicted RBP9.14□□□□□ -0.95
CHD4-212ENST00000545083 KLF2Q9Y5W3 355 aaPredicted RBP9.14□□□□□ -0.95
CHD4-212ENST00000545083 FER1L5A0AVI2 2057 aa9.14□□□□□ -0.95
CHD4-212ENST00000545083 A0A1B0GUH1 482 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 CCDC78A2IDD5 438 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 OR6C74A6NCV1 312 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 MATN3O15232 486 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 IPO13O94829 963 aaKnown RBP9.13□□□□□ -0.95
CHD4-212ENST00000545083 CBSLP0DN79 551 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 MTHFD1P11586 935 aaKnown RBP9.13□□□□□ -0.95
CHD4-212ENST00000545083 ATP1A3P13637 1013 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 POLR2CP19387 275 aaPredicted RBP9.13□□□□□ -0.95
CHD4-212ENST00000545083 CA4P22748 312 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 CES1P23141 567 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 CBSP35520 551 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 CD86P42081 329 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 TSFMP43897 325 aaKnown RBP9.13□□□□□ -0.95
CHD4-212ENST00000545083 LMAN1P49257 510 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 ZNF165P49910 485 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 DMPKQ09013 629 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 GALNT2Q10471 571 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 TMEM115Q12893 351 aaPredicted RBP9.13□□□□□ -0.95
CHD4-212ENST00000545083 MMRN1Q13201 1228 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 NFE2L1Q14494 772 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 GSE1Q14687 1217 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 SSPNQ14714 243 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 KRT31Q15323 416 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 MLIPQ5VWP3 458 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 PDPK2PQ6A1A2 396 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 SPNS3Q6ZMD2 512 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 TMC3Q7Z5M5 1100 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 PPP1R32Q7Z5V6 425 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 OOSP2Q86WS3 158 aa9.13□□□□□ -0.95
CHD4-212ENST00000545083 NXPE1Q8N323 547 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms