RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 BTBD3Q9Y2F9 522 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 GPR45Q9Y5Y3 372 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 RGPD3A6NKT7 1758 aaPredicted RBP12.52□□□□□ -0.41
SMG8-202ENST00000543872 RGPD4Q7Z3J3 1758 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.41
SMG8-202ENST00000543872 PABPN1LA6NDY0 278 aaKnown RBP12.52□□□□□ -0.41
SMG8-202ENST00000543872 DNAJB5O75953 348 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 PRKD3O94806 890 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 FKBP9O95302 570 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 IFI30P13284 250 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 PRKACAP17612 351 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 PFKLP17858 780 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 MLLT3P42568 568 aaPredicted RBP12.52□□□□□ -0.41
SMG8-202ENST00000543872 HTR3AP46098 478 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 BAG6P46379 1132 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 ATP6AP1LQ52LC2 224 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 ZNF691Q5VV52 312 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 ISCA2Q86U28 154 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 FAM162AQ96A26 154 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 EMID1Q96A84 441 aaPredicted RBP12.52□□□□□ -0.41
SMG8-202ENST00000543872 PTERQ96BW5 349 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 OMA1Q96E52 524 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 NEDD4LQ96PU5 975 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 TNKS2Q9H2K2 1166 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 AMBNQ9NP70 447 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 USE1Q9NZ43 259 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 TRHDEQ9UKU6 1024 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 SNX8Q9Y5X2 465 aa12.52□□□□□ -0.41
SMG8-202ENST00000543872 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 NCF1BA6NI72 391 aaPredicted RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 NCF1CA8MVU1 366 aaPredicted RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 ERVH48-1M5A8F1 160 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 AREL1O15033 823 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 RGS10O43665 173 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 PEX10O60683 326 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 TULP3O75386 442 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 MED26O95402 600 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 CYP11A1P05108 521 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 NCF1P14598 390 aaPredicted RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 PAMP19021 973 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 LMO2P25791 158 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 GGT5P36269 586 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 HTR2BP41595 481 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 HERVK_113P63132 956 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 GPLD1P80108 840 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 AAK1Q2M2I8 961 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 PXDC1Q5TGL8 231 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 FAM160B1Q5W0V3 765 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 TMEM207Q6UWW9 146 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 CCDC28AQ8IWP9 274 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 TMEM199Q8N511 208 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 GALNT6Q8NCL4 622 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 C2CD4AQ8NCU7 369 aaPredicted RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 JPH3Q8WXH2 748 aaPredicted RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 ESAMQ96AP7 390 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 SLC47A1Q96FL8 570 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 UBXN10Q96LJ8 280 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 FSD1LQ9BXM9 530 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 ERVK-6Q9BXR3 956 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 OSGIN1Q9UJX0 560 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 USP21Q9UK80 565 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 CPNE3O75131 537 aaKnown RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 MATN4O95460 622 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 UBA1P22314 1058 aaKnown RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 EMX2Q04743 252 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 GTF2H3Q13889 308 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 CELF3Q5SZQ8 465 aaKnown RBP12.51□□□□□ -0.41
SMG8-202ENST00000543872 LAIR1Q6GTX8 287 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 PHYKPLQ8IUZ5 450 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 HID1Q8IV36 788 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 EID3Q8N140 333 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 C12orf42Q96LP6 360 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 UGT2B28Q9BY64 529 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 FBXL12Q9NXK8 326 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 STMN3Q9NZ72 180 aa12.51□□□□□ -0.41
SMG8-202ENST00000543872 C12orf71A8MTZ7 269 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 hCG_2039718K7EN88 272 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 TSPAN1O60635 241 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 ADRA1BP35368 520 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 CDKN2DP55273 166 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 NRG1Q02297 640 aaPredicted RBP12.5□□□□□ -0.41
SMG8-202ENST00000543872 ZNF438Q7Z4V0 828 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 NRARPQ7Z6K4 114 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 NECTIN4Q96NY8 510 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 FZD8Q9H461 694 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 SLC52A3Q9NQ40 469 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 GTF2IRD1Q9UHL9 959 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 PCDHGB6Q9Y5F9 930 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 BPTFQ12830 3046 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 A0A1W2PQ72 361 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 OR51F1A6NGY5 319 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 METTL15A6NJ78 407 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 MYO1GB0I1T2 1018 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 PRSS23O95084 383 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 NAGAP17050 411 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 CTRB1P17538 263 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 DNAJB1P25685 340 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 BRMS1LQ5PSV4 323 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms