RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 RPS24P62847 133 aaKnown RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 CYP4F2P78329 520 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 TRIM32Q13049 653 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 GRB7Q14451 532 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 XKR6Q5GH73 641 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 NANOGP8Q6NSW7 305 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 TMC5Q6UXY8 1006 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 UBE2R2Q712K3 238 aaPredicted RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 C11orf74Q86VG3 221 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 P2RY8Q86VZ1 359 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 LIX1Q8N485 282 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 KBTBD8Q8NFY9 601 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ATL1Q8WXF7 558 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 KHSRPQ92945 711 aaKnown RBP eCLIP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ISOC1Q96CN7 298 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 IMP4Q96G21 291 aaKnown RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 OLFM1Q99784 485 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 SLC29A1Q99808 456 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 TRIM8Q9BZR9 551 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 NANOGQ9H9S0 305 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 C1orf109Q9NX04 203 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 AHSPQ9NZD4 102 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 DNAJC15Q9Y5T4 150 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 DNAJC25-GNG10A0A024R161 153 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 J3QRK9 145 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 PRKD3O94806 890 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 FADS2O95864 444 aaKnown RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 S1PR4O95977 384 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 CDC42P60953 191 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 HMGCS1Q01581 520 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 INAQ16352 499 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 SULT1C3Q6IMI6 304 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 SERPINA9Q86WD7 417 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 KRT73Q86Y46 540 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 MINDY1Q8N5J2 469 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 NPLOC4Q8TAT6 608 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 FBXL8Q96CD0 374 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ZFYVE19Q96K21 471 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 SUSD3Q96L08 255 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 NSUN5Q96P11 429 aaKnown RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 DERL2Q9GZP9 239 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 KCTD5Q9NXV2 234 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 PCDHGA7Q9Y5G6 932 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 COL5A3P25940 1745 aaPredicted RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 GLYATL1P3A0A0U1RQE8 302 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 A0A0U1RQF3 1178 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 A0A1B0GVG6 124 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 GPR32O75388 356 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ASGR1P07306 291 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ZNF182P17025 639 aaPredicted RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ARSFP54793 590 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 SPATS1Q496A3 300 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 RBM48Q5RL73 367 aaKnown RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 PM20D1Q6GTS8 502 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 TRMT11Q7Z4G4 463 aaKnown RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ISCA2Q86U28 154 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 EGFL6Q8IUX8 553 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 TTC30BQ8N4P2 665 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ACVR1CQ8NER5 493 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ZNF420Q8TAQ5 688 aaPredicted RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 HPS1Q92902 700 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 MYO19Q96H55 970 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 KLHL32Q96NJ5 620 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 MUS81Q96NY9 551 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 CYP2S1Q96SQ9 504 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 FEM1AQ9BSK4 669 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 TTPALQ9BTX7 342 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 TMEM245Q9H330 911 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 TRPC4Q9UBN4 977 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 EVLQ9UI08 416 aaPredicted RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 KCNE2Q9Y6J6 123 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 AURKAO14965 403 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 SNAP29O95721 258 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ENO2P09104 434 aaPredicted RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ATXN8OSP0DMR3 200 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 PRPS2P11908 318 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 BMP2P12643 396 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ITGA2P17301 1181 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 PPIBP23284 216 aaKnown RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 VARSP26640 1264 aaKnown RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ALDH3A2P51648 485 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 RPS14P62263 151 aaKnown RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 SH3BP2P78314 561 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 GALNT1Q10472 559 aaPredicted RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 SERINC3Q13530 473 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ZBTB6Q15916 424 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ALFQ53S48 1182 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 MS4A13Q5J8X5 152 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 C6orf136Q5SQH8 315 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 PDZK1Q5T2W1 519 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 TYW3Q6IPR3 259 aaKnown RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ERICH5Q6P6B1 374 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 HACD2Q6Y1H2 254 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 PRR23BQ6ZRT6 265 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 SH2D5Q6ZV89 423 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 AHSA2Q719I0 299 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ZC3H7AQ8IWR0 971 aaKnown RBP8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 TBC1D19Q8N5T2 526 aa8.09□□□□□ -1.11
PRKAB1-207ENST00000542698 ANKFN1Q8N957 763 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms