RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 POLE3Q9NRF9 147 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 TLR6Q9Y2C9 796 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 HS3ST4Q9Y661 456 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 A0A087WXM4 84 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 F5H423 210 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 KCNK1O00180 336 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ADAM12O43184 909 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 HOXC11O43248 304 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 RFPL1O75677 317 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 SULT1C4O75897 302 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 HAPLN1P10915 354 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ITGA2P17301 1181 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 CCNA2P20248 432 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 HOXC12P31275 282 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 CCR1P32246 355 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 HTR7P34969 479 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ARL1P40616 181 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ST13P50502 369 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 SEC13P55735 322 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 SRP54P61011 504 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 TLE2Q04725 743 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 SCRN3Q0VDG4 424 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 KLF10Q13118 480 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 PGS1Q32NB8 556 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 SPATS1Q496A3 300 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 PIK3R6Q5UE93 754 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 LYSMD3Q7Z3D4 306 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ZC3H7AQ8IWR0 971 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 DSELQ8IZU8 1212 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 FIBCD1Q8N539 461 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 KYQ8NBH2 561 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 GALNT11Q8NCW6 608 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 CCNYQ8ND76 341 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ADAMTS16Q8TE57 1224 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ARNTL2Q8WYA1 636 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 LRTOMTQ8WZ04 291 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 OMA1Q96E52 524 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 SLC29A1Q99808 456 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 FBXO44Q9H4M3 255 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 RC3H2Q9HBD1 1191 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 SYTL2Q9HCH5 934 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ADA2Q9NZK5 511 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 UBA2Q9UBT2 640 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 GNPTGQ9UJJ9 305 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 DUSP12Q9UNI6 340 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 ERGIC3Q9Y282 383 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 AP4S1Q9Y587 144 aa7.91□□□□□ -1.14
PDLIM5-221ENST00000542407 CCDC78A2IDD5 438 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 A8MVJ9 347 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 KPNA4O00629 521 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 KCNH1O95259 989 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 IGLV3-27P01718 113 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 ZDHHC11BP0C7U3 371 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 DBTP11182 482 aaKnown RBP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 ZNF26P17031 533 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 GSTM2P28161 218 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 TPTEP56180 551 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 FOXK2Q01167 660 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 ZNF33AQ06730 810 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 ELAVL2Q12926 359 aaKnown RBP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 PMS2P3Q13401 168 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 ART3Q13508 389 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 ACAP2Q15057 778 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 FSCBQ5H9T9 825 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 MTX3Q5HYI7 312 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 TEDDM1Q5T9Z0 273 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 ALG1LQ6GMV1 187 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 PRSS55Q6UWB4 352 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 PDZD4Q76G19 769 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 RHOUQ7L0Q8 258 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 LPGAT1Q92604 370 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 SERPINB11Q96P15 392 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 MLPHQ9BV36 600 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 OSBPL11Q9BXB4 747 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 CLPBQ9H078 707 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 RHBGQ9H310 441 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 POLR1BQ9H9Y6 1135 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 C20orf96Q9NUD7 363 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 ADGRE2Q9UHX3 823 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 SLC27A5Q9Y2P5 690 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
PDLIM5-221ENST00000542407 WDR27A2RRH5 827 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 FAM159BA6NKW6 160 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 WASH4PA8MWX3 477 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 ZBTB24O43167 697 aaPredicted RBP7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 CACNG3O60359 315 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 TMEM127O75204 238 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 MYO1DO94832 1006 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 CKMT2P17540 419 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 PPM1FP49593 454 aaPredicted RBP7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 POU6F2P78424 691 aaPredicted RBP7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 PLIN5Q00G26 463 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 OLIG2Q13516 323 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 CEACAM7Q14002 265 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 IKBKEQ14164 716 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 N4BP2L1Q5TBK1 243 aaPredicted RBP7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 SLC8B1Q6J4K2 584 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 ANKRD26P1Q6NSI1 321 aa7.9□□□□□ -1.15
PDLIM5-221ENST00000542407 KIAA1841Q6NSI8 718 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms